RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FAM151AQ8WW52 585 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 NEK1Q96PY6 1258 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 MTA3Q9BTC8 594 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 OSBPL5Q9H0X9 879 aaPredicted RBP14.69□□□□□ -0.06
TPM1-209ENST00000558072 PI4KBQ9UBF8 816 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 SWAP70Q9UH65 585 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 SNX14Q9Y5W7 946 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 LAMB1P07942 1786 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 CNTNAP1P78357 1384 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 POLR2AP24928 1970 aaKnown RBP14.69□□□□□ -0.06
TPM1-209ENST00000558072 PITPNM2Q9BZ72 1349 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 CYP2D7A0A087X1C5 515 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 ANKRD1Q15327 319 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 C12orf60Q5U649 245 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 BLOC1S2Q6QNY1 142 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
TPM1-209ENST00000558072 CHMP4CQ96CF2 233 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 EHD4Q9H223 541 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 MYH1P12882 1939 aa14.68□□□□□ -0.06
TPM1-209ENST00000558072 WDR19Q8NEZ3 1342 aa14.67□□□□□ -0.06
TPM1-209ENST00000558072 BECN1Q14457 450 aa14.67□□□□□ -0.06
TPM1-209ENST00000558072 SART3Q15020 963 aaKnown RBP14.67□□□□□ -0.06
TPM1-209ENST00000558072 MAP1SQ66K74 1059 aaPredicted RBP14.67□□□□□ -0.06
TPM1-209ENST00000558072 ZNF784Q8NCA9 323 aaPredicted RBP14.67□□□□□ -0.06
TPM1-209ENST00000558072 ESR2Q92731 530 aa14.67□□□□□ -0.06
TPM1-209ENST00000558072 MKNK2Q9HBH9 465 aa14.67□□□□□ -0.06
TPM1-209ENST00000558072 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
TPM1-209ENST00000558072 FZD1Q9UP38 647 aa14.67□□□□□ -0.06
TPM1-209ENST00000558072 ATRNL1Q5VV63 1379 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 ROBO3Q96MS0 1386 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 E7EWF7 191 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 KIF3CO14782 793 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 ORC4O43929 436 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 VEGFAP15692 232 aaPredicted RBP14.66□□□□□ -0.06
TPM1-209ENST00000558072 MCM5P33992 734 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 RUFY3Q7L099 469 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 STK11IPQ8N1F8 1099 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
TPM1-209ENST00000558072 JAKMIP1Q96N16 626 aaKnown RBP14.66□□□□□ -0.06
TPM1-209ENST00000558072 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
TPM1-209ENST00000558072 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
TPM1-209ENST00000558072 SERPINB13Q9UIV8 391 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
TPM1-209ENST00000558072 SSC5DA1L4H1 1573 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 ERICH2A1L162 156 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 TRAF5O00463 557 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 FGRP09769 529 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 CASTP20810 708 aaKnown RBP14.65□□□□□ -0.06
TPM1-209ENST00000558072 HAND2P61296 217 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
TPM1-209ENST00000558072 IQCA1Q86XH1 822 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
TPM1-209ENST00000558072 TMTC2Q8N394 836 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 CRACR2BQ8N4Y2 399 aaPredicted RBP14.65□□□□□ -0.06
TPM1-209ENST00000558072 CCDC17Q96LX7 622 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 ALDH8A1Q9H2A2 487 aaPredicted RBP14.65□□□□□ -0.06
TPM1-209ENST00000558072 TOMM22Q9NS69 142 aa14.65□□□□□ -0.06
TPM1-209ENST00000558072 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 DDTLA6NHG4 134 aaPredicted RBP14.64□□□□□ -0.07
TPM1-209ENST00000558072 TBC1D12O60347 775 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 FGD1P98174 961 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 C16orf86Q6ZW13 317 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 TMEM87BQ96K49 555 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 DAXXQ9UER7 740 aaPredicted RBP14.64□□□□□ -0.07
TPM1-209ENST00000558072 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 TAF6LQ9Y6J9 622 aa14.64□□□□□ -0.07
TPM1-209ENST00000558072 RPS6KB1P23443 525 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 NEK4P51957 841 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 RASA3Q14644 834 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 DCAF15Q66K64 600 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 METTL16Q86W50 562 aaKnown RBP14.63□□□□□ -0.07
TPM1-209ENST00000558072 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 FBXL16Q8N461 479 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 SNX21Q969T3 373 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 GINM1Q9NU53 330 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 PDRG1Q9NUG6 133 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
TPM1-209ENST00000558072 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
TPM1-209ENST00000558072 CTDSPL2Q05D32 466 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 NKX2-3Q8TAU0 364 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 UBAC1Q9BSL1 405 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 PGAP2Q9UHJ9 254 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
TPM1-209ENST00000558072 TSPY2A6NKD2 308 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
TPM1-209ENST00000558072 NF2P35240 595 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms