RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RAET1EQ8TD07 263 aa17.9■□□□□ 0.46
SHMT2-235ENST00000557740 SMCR8Q8TEV9 937 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 CCDC8Q9H0W5 538 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 SRRDQ9UH36 339 aa17.9■□□□□ 0.46
SHMT2-235ENST00000557740 HERC5Q9UII4 1024 aaKnown RBP17.9■□□□□ 0.46
SHMT2-235ENST00000557740 ZSWIM8A7E2V4 1837 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 IGSF3O75054 1194 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 BCRP11274 1271 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 EN2P19622 333 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-235ENST00000557740 OSBPP22059 807 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 CTGFP29279 349 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 FCGRTP55899 365 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 DHX36Q9H2U1 1008 aaKnown RBP17.89■□□□□ 0.45
SHMT2-235ENST00000557740 PIH1D3Q9NQM4 214 aaKnown RBP17.89■□□□□ 0.45
SHMT2-235ENST00000557740 EXOC6BQ9Y2D4 811 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 MYPNQ86TC9 1320 aa17.89■□□□□ 0.45
SHMT2-235ENST00000557740 RBBP6Q7Z6E9 1792 aaKnown RBP17.89■□□□□ 0.45
SHMT2-235ENST00000557740 SLC34A2O95436 690 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 ADGRA1Q86SQ6 560 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 AACSQ86V21 672 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-235ENST00000557740 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 AGTPBP1Q9UPW5 1226 aa17.88■□□□□ 0.45
SHMT2-235ENST00000557740 IDH1O75874 414 aaKnown RBP17.87■□□□□ 0.45
SHMT2-235ENST00000557740 CAP2P40123 477 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 PPP4CP60510 307 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 TGFBRAP1Q8WUH2 860 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 PNMA3Q9UL41 463 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 FLT1P17948 1338 aa17.87■□□□□ 0.45
SHMT2-235ENST00000557740 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 CYP7A1P22680 504 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 GRK4P32298 578 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 PRKCZQ05513 592 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 SPP2Q13103 211 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 CRACR2BQ8N4Y2 399 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-235ENST00000557740 PROCA1Q8NCQ7 364 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-235ENST00000557740 ZNF280CQ8ND82 737 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 AS3MTQ9HBK9 375 aa17.86■□□□□ 0.45
SHMT2-235ENST00000557740 HLA-DOAP06340 250 aa17.85■□□□□ 0.45
SHMT2-235ENST00000557740 HMGCS2P54868 508 aa17.85■□□□□ 0.45
SHMT2-235ENST00000557740 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
SHMT2-235ENST00000557740 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
SHMT2-235ENST00000557740 BIN2Q9UBW5 565 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-235ENST00000557740 HMMRO75330 724 aa17.84■□□□□ 0.45
SHMT2-235ENST00000557740 PABPC4Q13310 644 aaKnown RBP eCLIP17.84■□□□□ 0.45
SHMT2-235ENST00000557740 RRP1BQ14684 758 aaKnown RBP17.84■□□□□ 0.45
SHMT2-235ENST00000557740 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
SHMT2-235ENST00000557740 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
SHMT2-235ENST00000557740 DDX19BQ9UMR2 479 aa17.84■□□□□ 0.45
SHMT2-235ENST00000557740 CENPFP49454 3210 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 TNPO2O14787 897 aaKnown RBP17.83■□□□□ 0.44
SHMT2-235ENST00000557740 ASNSP08243 561 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 DYNLL1P63167 89 aaKnown RBP17.83■□□□□ 0.44
SHMT2-235ENST00000557740 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
SHMT2-235ENST00000557740 MAGEB6Q8N7X4 407 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 MIGA1Q8NAN2 632 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 IL1RAPL2Q9NP60 686 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
SHMT2-235ENST00000557740 PTPRFP10586 1907 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 USP5P45974 858 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 UBXN2AP68543 259 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 MTFR1Q15390 333 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 FAM110CQ1W6H9 321 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
SHMT2-235ENST00000557740 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 RHPN1Q8TCX5 695 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 DNAJC18Q9H819 358 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
SHMT2-235ENST00000557740 APBB1O00213 710 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 MTMR2Q13614 643 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 RPAP2Q8IXW5 612 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-235ENST00000557740 CLASRPQ8N2M8 674 aaKnown RBP17.81■□□□□ 0.44
SHMT2-235ENST00000557740 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
SHMT2-235ENST00000557740 ANTXR1Q9H6X2 564 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 TMOD4Q9NZQ9 345 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 GABRQQ9UN88 632 aa17.81■□□□□ 0.44
SHMT2-235ENST00000557740 GDF11O95390 407 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 GCLCP48506 637 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-235ENST00000557740 FLT3LGP49771 235 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
SHMT2-235ENST00000557740 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 METTL16Q86W50 562 aaKnown RBP17.8■□□□□ 0.44
SHMT2-235ENST00000557740 NKX2-3Q8TAU0 364 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 COA7Q96BR5 231 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 KIF1BPQ96EK5 621 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 GINM1Q9NU53 330 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 ZBTB21Q9ULJ3 1066 aa17.8■□□□□ 0.44
SHMT2-235ENST00000557740 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
SHMT2-235ENST00000557740 ADCY3O60266 1144 aa17.79■□□□□ 0.44
SHMT2-235ENST00000557740 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
SHMT2-235ENST00000557740 CCL5P13501 91 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms