RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 TRIM37O94972 964 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 SNRPA1P09661 255 aaKnown RBP7.61□□□□□ -1.19
FOXN3-218ENST00000557718 RLBP1P12271 317 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 PIP4K2AP48426 406 aaPredicted RBP7.61□□□□□ -1.19
FOXN3-218ENST00000557718 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 HDGFL1Q5TGJ6 251 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 FAM196AQ6ZSG2 479 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 TTC5Q8N0Z6 440 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 MDFIQ99750 246 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
FOXN3-218ENST00000557718 DDX60Q8IY21 1712 aaKnown RBP7.61□□□□□ -1.19
FOXN3-218ENST00000557718 LOC102724428A0A0B4J2F2 783 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 SIN3BO75182 1162 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 CYP19A1P11511 503 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 EIF2S2P20042 333 aaKnown RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 ALAS2P22557 587 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 KCNQ4P56696 695 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 SIK1P57059 783 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 IRX6P78412 446 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 SFSWAPQ12872 951 aaKnown RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 RHPN1Q8TCX5 695 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 PLVAPQ9BX97 442 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 TSPAN10Q9H1Z9 355 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 SMC4Q9NTJ3 1288 aa7.6□□□□□ -1.19
FOXN3-218ENST00000557718 NOB1Q9ULX3 412 aaKnown RBP7.6□□□□□ -1.19
FOXN3-218ENST00000557718 ADCY9O60503 1353 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 ATP9BO43861 1147 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 A1BGP04217 495 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 TRIM27P14373 513 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 PSMA6P60900 246 aaKnown RBP7.59□□□□□ -1.19
FOXN3-218ENST00000557718 XP32Q5T750 250 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 C1orf53Q5VUE5 145 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 CCDC30Q5VVM6 783 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 LINC00116Q8NCU8 138 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 SLC30A3Q99726 388 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 DDX21Q9NR30 783 aaKnown RBP eCLIP7.59□□□□□ -1.19
FOXN3-218ENST00000557718 PXDNLA1KZ92 1463 aa7.59□□□□□ -1.19
FOXN3-218ENST00000557718 ABCC4O15439 1325 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 TAF1P21675 1872 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 SPEF2Q9C093 1822 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-218ENST00000557718 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
FOXN3-218ENST00000557718 AMIGO3Q86WK7 504 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-218ENST00000557718 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
FOXN3-218ENST00000557718 ZBTB1Q9Y2K1 713 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 HCN4Q9Y3Q4 1203 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 A0A1B0GUL6 1792 aa7.58□□□□□ -1.2
FOXN3-218ENST00000557718 KIF16BQ96L93 1317 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
FOXN3-218ENST00000557718 M0R2N6 131 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 SPATA31C1P0DKV0 1188 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 FRAT1Q92837 279 aaPredicted RBP7.57□□□□□ -1.2
FOXN3-218ENST00000557718 HSH2DQ96JZ2 352 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 CRBNQ96SW2 442 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 DBF4Q9UBU7 674 aaPredicted RBP7.57□□□□□ -1.2
FOXN3-218ENST00000557718 CHMP3Q9Y3E7 222 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
FOXN3-218ENST00000557718 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 NRXN2Q9P2S2 1712 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 F6X3S4 739 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 MYL6BP14649 208 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 CRKLP46109 303 aaKnown RBP7.56□□□□□ -1.2
FOXN3-218ENST00000557718 TTLL7Q6ZT98 887 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 SMIM5Q71RC9 77 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 SIX5Q8N196 739 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
FOXN3-218ENST00000557718 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 ARHGAP45Q92619 1136 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 TNFRSF25Q93038 417 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 CEP63Q96MT8 703 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 ANKIB1Q9P2G1 1089 aa7.56□□□□□ -1.2
FOXN3-218ENST00000557718 CACNA1SQ13698 1873 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 PTPRCP08575 1304 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 TNRC6CQ9HCJ0 1690 aaKnown RBP7.55□□□□□ -1.2
FOXN3-218ENST00000557718 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 PLSCR1O15162 318 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 DKK1O94907 266 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 EIF5P55010 431 aaKnown RBP7.55□□□□□ -1.2
FOXN3-218ENST00000557718 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 TXNRD1Q16881 649 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 ZNF280CQ8ND82 737 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 EXOC6Q8TAG9 804 aa7.55□□□□□ -1.2
FOXN3-218ENST00000557718 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-218ENST00000557718 TEX13AQ9BXU3 409 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms