RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 TBC1D2Q9BYX2 928 aa22.79■■□□□ 1.24
ABCD4-228ENST00000557588 NBPF3Q9H094 633 aa22.79■■□□□ 1.24
ABCD4-228ENST00000557588 OSBPL5Q9H0X9 879 aaPredicted RBP22.79■■□□□ 1.24
ABCD4-228ENST00000557588 GJD2Q9UKL4 321 aa22.79■■□□□ 1.24
ABCD4-228ENST00000557588 ZMYND8Q9ULU4 1186 aaPredicted RBP22.79■■□□□ 1.24
ABCD4-228ENST00000557588 ANP32CO43423 234 aa22.78■■□□□ 1.24
ABCD4-228ENST00000557588 LRIT3Q3SXY7 679 aa22.78■■□□□ 1.24
ABCD4-228ENST00000557588 SPTY2D1Q68D10 685 aaPredicted RBP22.78■■□□□ 1.24
ABCD4-228ENST00000557588 HMX1Q9NP08 348 aaPredicted RBP22.78■■□□□ 1.24
ABCD4-228ENST00000557588 ABCF2Q9UG63 623 aa22.78■■□□□ 1.24
ABCD4-228ENST00000557588 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
ABCD4-228ENST00000557588 SPP2Q13103 211 aa22.77■■□□□ 1.24
ABCD4-228ENST00000557588 PABPC4Q13310 644 aaKnown RBP eCLIP22.77■■□□□ 1.24
ABCD4-228ENST00000557588 DEFB123Q8N688 67 aa22.77■■□□□ 1.24
ABCD4-228ENST00000557588 ZNF280CQ8ND82 737 aa22.77■■□□□ 1.24
ABCD4-228ENST00000557588 FAM196BA6NMK8 535 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 TRIM32Q13049 653 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 ZNF384Q8TF68 577 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 C11orf49Q9H6J7 331 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.76■■□□□ 1.23
ABCD4-228ENST00000557588 COPRSQ9NQ92 184 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 MORF4L1Q9UBU8 362 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 OGDHLQ9ULD0 1010 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 STXBP5LQ9Y2K9 1186 aa22.76■■□□□ 1.23
ABCD4-228ENST00000557588 MAGEA10P43363 369 aaPredicted RBP22.75■■□□□ 1.23
ABCD4-228ENST00000557588 HMGCS2P54868 508 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 MECOMQ03112 1051 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 ALDH1L2Q3SY69 923 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 SH3D19Q5HYK7 790 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 TDHQ8IZJ6 230 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 TRIB2Q92519 343 aa22.75■■□□□ 1.23
ABCD4-228ENST00000557588 ASCC2Q9H1I8 757 aaPredicted RBP22.75■■□□□ 1.23
ABCD4-228ENST00000557588 PA2G4Q9UQ80 394 aaKnown RBP22.75■■□□□ 1.23
ABCD4-228ENST00000557588 SIPA1L1O43166 1804 aa22.74■■□□□ 1.23
ABCD4-228ENST00000557588 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
ABCD4-228ENST00000557588 E9PSI1 815 aa22.73■■□□□ 1.23
ABCD4-228ENST00000557588 SYN1P17600 705 aa22.73■■□□□ 1.23
ABCD4-228ENST00000557588 CAP2P40123 477 aa22.73■■□□□ 1.23
ABCD4-228ENST00000557588 PFASO15067 1338 aa22.73■■□□□ 1.23
ABCD4-228ENST00000557588 MVPQ14764 893 aaKnown RBP22.72■■□□□ 1.23
ABCD4-228ENST00000557588 Q7L0L9 218 aa22.72■■□□□ 1.23
ABCD4-228ENST00000557588 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
ABCD4-228ENST00000557588 MAST2Q6P0Q8 1798 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 A0A1B0GUL7 405 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 TIMM10P62072 90 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 RRP1BQ14684 758 aaKnown RBP22.71■■□□□ 1.23
ABCD4-228ENST00000557588 SOCS4Q8WXH5 440 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 SMC4Q9NTJ3 1288 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 MTMR10Q9NXD2 777 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 HDAC5Q9UQL6 1122 aa22.71■■□□□ 1.23
ABCD4-228ENST00000557588 XRCC5P13010 732 aaKnown RBP22.7■■□□□ 1.22
ABCD4-228ENST00000557588 PRKAR2AP13861 404 aaKnown RBP22.7■■□□□ 1.22
ABCD4-228ENST00000557588 GSTO1P78417 241 aa22.7■■□□□ 1.22
ABCD4-228ENST00000557588 NSUN4Q96CB9 384 aaKnown RBP22.7■■□□□ 1.22
ABCD4-228ENST00000557588 XAGE2Q96GT9 111 aa22.7■■□□□ 1.22
ABCD4-228ENST00000557588 AS3MTQ9HBK9 375 aa22.7■■□□□ 1.22
ABCD4-228ENST00000557588 HERC5Q9UII4 1024 aaKnown RBP22.7■■□□□ 1.22
ABCD4-228ENST00000557588 FRMPD3Q5JV73 1810 aa22.69■■□□□ 1.22
ABCD4-228ENST00000557588 COL6A1P12109 1028 aa22.69■■□□□ 1.22
ABCD4-228ENST00000557588 WDR18Q9BV38 432 aa22.69■■□□□ 1.22
ABCD4-228ENST00000557588 UBE2OQ9C0C9 1292 aaKnown RBP22.69■■□□□ 1.22
ABCD4-228ENST00000557588 AKAP2Q9Y2D5 859 aa22.69■■□□□ 1.22
ABCD4-228ENST00000557588 LDHCP07864 332 aa22.68■■□□□ 1.22
ABCD4-228ENST00000557588 HOXA7P31268 230 aaPredicted RBP22.68■■□□□ 1.22
ABCD4-228ENST00000557588 IRX3P78415 501 aaPredicted RBP22.68■■□□□ 1.22
ABCD4-228ENST00000557588 MTMR2Q13614 643 aa22.68■■□□□ 1.22
ABCD4-228ENST00000557588 HMG20BQ9P0W2 317 aa22.68■■□□□ 1.22
ABCD4-228ENST00000557588 FOCADQ5VW36 1801 aa22.67■■□□□ 1.22
ABCD4-228ENST00000557588 CYP2B6P20813 491 aa22.67■■□□□ 1.22
ABCD4-228ENST00000557588 TRMT44Q8IYL2 757 aaKnown RBP22.67■■□□□ 1.22
ABCD4-228ENST00000557588 NUDT12Q9BQG2 462 aa22.67■■□□□ 1.22
ABCD4-228ENST00000557588 BACE1P56817 501 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 TFCP2Q12800 502 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 SPATA5Q8NB90 893 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 TXNRD2Q9NNW7 524 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
ABCD4-228ENST00000557588 LAMA2P24043 3122 aaKnown RBP22.65■■□□□ 1.22
ABCD4-228ENST00000557588 ASNSP08243 561 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 ZKSCAN1P17029 563 aaPredicted RBP22.65■■□□□ 1.22
ABCD4-228ENST00000557588 HERVK_113P62684 666 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 PI16Q6UXB8 463 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 GPRC5AQ8NFJ5 357 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 USP6NLQ92738 828 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 MEIS3Q99687 375 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 TMOD4Q9NZQ9 345 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 PI4KBQ9UBF8 816 aa22.65■■□□□ 1.22
ABCD4-228ENST00000557588 VCANP13611 3396 aa22.64■■□□□ 1.21
ABCD4-228ENST00000557588 ARID4AP29374 1257 aaPredicted RBP22.64■■□□□ 1.21
ABCD4-228ENST00000557588 MAPK4P31152 587 aa22.64■■□□□ 1.21
ABCD4-228ENST00000557588 MTX1Q13505 466 aa22.64■■□□□ 1.21
ABCD4-228ENST00000557588 PDE3AQ14432 1141 aa22.64■■□□□ 1.21
ABCD4-228ENST00000557588 P2RX7Q99572 595 aaKnown RBP22.64■■□□□ 1.21
ABCD4-228ENST00000557588 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
ABCD4-228ENST00000557588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.64■■□□□ 1.21
ABCD4-228ENST00000557588 CACNB2Q08289 660 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms