RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
NEDD1-211ENST00000557454 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
NEDD1-211ENST00000557454 PEX10O60683 326 aa12.04□□□□□ -0.48
NEDD1-211ENST00000557454 PBX2P40425 430 aa12.04□□□□□ -0.48
NEDD1-211ENST00000557454 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
NEDD1-211ENST00000557454 SLC39A5Q6ZMH5 540 aa12.04□□□□□ -0.48
NEDD1-211ENST00000557454 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
NEDD1-211ENST00000557454 PTPRFP10586 1907 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 FRMPD3Q5JV73 1810 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 AAK1Q2M2I8 961 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
NEDD1-211ENST00000557454 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 LPAR1Q92633 364 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 PBX4Q9BYU1 374 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
NEDD1-211ENST00000557454 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
NEDD1-211ENST00000557454 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
NEDD1-211ENST00000557454 CFAP54Q96N23 3096 aa12.02□□□□□ -0.48
NEDD1-211ENST00000557454 PI4KAP2A4QPH2 592 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 RGS2P41220 211 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 CASP7P55210 303 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 SNX17Q15036 470 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 PI4KAP1Q8N8J0 262 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
NEDD1-211ENST00000557454 TBC1D22AQ8WUA7 517 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 USP6NLQ92738 828 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 APBA2Q99767 749 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
NEDD1-211ENST00000557454 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
NEDD1-211ENST00000557454 SLURP2P0DP57 97 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 FPGSQ05932 587 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
NEDD1-211ENST00000557454 CDC42EP5Q6NZY7 148 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 KSR2Q6VAB6 950 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 ZNF594Q96JF6 807 aaPredicted RBP12.01□□□□□ -0.49
NEDD1-211ENST00000557454 MRIQ9BWK5 157 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 MAST3O60307 1309 aa12.01□□□□□ -0.49
NEDD1-211ENST00000557454 CNGA1P29973 690 aa12□□□□□ -0.49
NEDD1-211ENST00000557454 SKIV2LQ15477 1246 aaKnown RBP12□□□□□ -0.49
NEDD1-211ENST00000557454 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
NEDD1-211ENST00000557454 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
NEDD1-211ENST00000557454 PRR33A8MZF0 331 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 KBTBD13C9JR72 458 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 ERC2O15083 957 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 MSCO60682 206 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
NEDD1-211ENST00000557454 HMGCS2P54868 508 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 TLE2Q04725 743 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 PABPC4Q13310 644 aaKnown RBP eCLIP11.99□□□□□ -0.49
NEDD1-211ENST00000557454 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 GCKRQ14397 625 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 MORN1Q5T089 497 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 GPR142Q7Z601 462 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 VPS37DQ86XT2 251 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 FBXL18Q96ME1 805 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 UIMC1Q96RL1 719 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 PORCNQ9H237 461 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 CNNM1Q9NRU3 951 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 FLRT1Q9NZU1 646 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 RLFQ13129 1914 aa11.99□□□□□ -0.49
NEDD1-211ENST00000557454 PHIPQ8WWQ0 1821 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 CTNND1O60716 968 aaKnown RBP11.98□□□□□ -0.49
NEDD1-211ENST00000557454 CLTBP09497 229 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 RAG1P15918 1043 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 MAPK4P31152 587 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 FBXO33Q7Z6M2 555 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 FERMT2Q96AC1 680 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
NEDD1-211ENST00000557454 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 UTYO14607 1347 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 TLL1O43897 1013 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 ADCYAP1R1P41586 468 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
NEDD1-211ENST00000557454 SPP2Q13103 211 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 TRPV1Q8NER1 839 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 GPRC5AQ8NFJ5 357 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEDD1-211ENST00000557454 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
NEDD1-211ENST00000557454 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.49
NEDD1-211ENST00000557454 KIAA0355O15063 1070 aa11.96□□□□□ -0.49
NEDD1-211ENST00000557454 FOXO4P98177 505 aa11.96□□□□□ -0.49
NEDD1-211ENST00000557454 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms