RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 AEBP1Q8IUX7 1158 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 ELMO3Q96BJ8 720 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 VAV3Q9UKW4 847 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 PLAGL2Q9UPG8 496 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 AK5Q9Y6K8 562 aa7.91□□□□□ -1.14
VRK1-207ENST00000557352 JUNBP17275 347 aaPredicted RBP7.9□□□□□ -1.14
VRK1-207ENST00000557352 PRKCQQ04759 706 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 PLCL1Q15111 1095 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
VRK1-207ENST00000557352 TTBK2Q6IQ55 1244 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 OGFOD2Q6N063 350 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 CDC37L1Q7L3B6 337 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 GAL3ST3Q96A11 431 aa7.9□□□□□ -1.14
VRK1-207ENST00000557352 DUSP9Q99956 384 aaKnown RBP7.9□□□□□ -1.14
VRK1-207ENST00000557352 CD8BP10966 210 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 FGD1P98174 961 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 CYFIP1Q7L576 1253 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 KCT2Q8NC54 265 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 ZNF507Q8TCN5 953 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 ASIC4Q96FT7 647 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 PLPPR2Q96GM1 343 aa7.89□□□□□ -1.15
VRK1-207ENST00000557352 TMEM265A0A087WTH1 108 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 PRAMEF27A3QJZ7 478 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 PDIA4P13667 645 aaKnown RBP7.88□□□□□ -1.15
VRK1-207ENST00000557352 ITIH2P19823 946 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 CD96P40200 585 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 CCDC85BQ15834 202 aaPredicted RBP7.88□□□□□ -1.15
VRK1-207ENST00000557352 AOC3Q16853 763 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 ZNF792Q3KQV3 632 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.88□□□□□ -1.15
VRK1-207ENST00000557352 HDXQ7Z353 690 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 HRASLS5Q96KN8 279 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 TNKS2Q9H2K2 1166 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
VRK1-207ENST00000557352 IGF2BP3O00425 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
VRK1-207ENST00000557352 PAPLNO95428 1278 aa7.87□□□□□ -1.15
VRK1-207ENST00000557352 FUT4P22083 530 aa7.87□□□□□ -1.15
VRK1-207ENST00000557352 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
VRK1-207ENST00000557352 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
VRK1-207ENST00000557352 LRIG2O94898 1065 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 EOMESO95936 686 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 CDK8P49336 464 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 RPS26P62854 115 aaKnown RBP7.86□□□□□ -1.15
VRK1-207ENST00000557352 WNT10AQ9GZT5 417 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 FBRSQ9HAH7 460 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 PCDHB5Q9Y5E4 795 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 SNCAIPQ9Y6H5 919 aa7.86□□□□□ -1.15
VRK1-207ENST00000557352 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
VRK1-207ENST00000557352 WIPI1Q5MNZ9 446 aaPredicted RBP7.85□□□□□ -1.15
VRK1-207ENST00000557352 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
VRK1-207ENST00000557352 NPAS4Q8IUM7 802 aa7.85□□□□□ -1.15
VRK1-207ENST00000557352 POU5F2Q8N7G0 328 aa7.85□□□□□ -1.15
VRK1-207ENST00000557352 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
VRK1-207ENST00000557352 SNX11Q9Y5W9 270 aa7.85□□□□□ -1.15
VRK1-207ENST00000557352 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
VRK1-207ENST00000557352 AGMOQ6ZNB7 445 aa7.84□□□□□ -1.15
VRK1-207ENST00000557352 SPACA3Q8IXA5 215 aa7.84□□□□□ -1.15
VRK1-207ENST00000557352 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
VRK1-207ENST00000557352 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
VRK1-207ENST00000557352 SLITRK5O94991 958 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
VRK1-207ENST00000557352 CAP2P40123 477 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 LIG3P49916 1009 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 ETF1P62495 437 aaKnown RBP7.83□□□□□ -1.16
VRK1-207ENST00000557352 DAB2P98082 770 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 SEPT6Q14141 434 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 MAP3K11Q16584 847 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 NKG7Q16617 165 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
VRK1-207ENST00000557352 PRDM5Q9NQX1 630 aaPredicted RBP7.83□□□□□ -1.16
VRK1-207ENST00000557352 GFRA2O00451 464 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 LMNB1P20700 586 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 CARMIL2Q6F5E8 1435 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 HID1Q8IV36 788 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 PI4K2BQ8TCG2 481 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 RC3H2Q9HBD1 1191 aaKnown RBP7.82□□□□□ -1.16
VRK1-207ENST00000557352 MAPK8IP1Q9UQF2 711 aa7.82□□□□□ -1.16
VRK1-207ENST00000557352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.82□□□□□ -1.16
VRK1-207ENST00000557352 CNTNAP4Q9C0A0 1308 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 GNAT3A8MTJ3 354 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 C8AP07357 584 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 GRK4P32298 578 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 PSMD2Q13200 908 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 FZD5Q13467 585 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 ANGEL2Q5VTE6 544 aaKnown RBP7.81□□□□□ -1.16
VRK1-207ENST00000557352 MFSD2AQ8NA29 543 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 ASB11Q8WXH4 323 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 MIPEPQ99797 713 aa7.81□□□□□ -1.16
VRK1-207ENST00000557352 BIN1O00499 593 aa7.8□□□□□ -1.16
VRK1-207ENST00000557352 TFE3P19532 575 aaPredicted RBP7.8□□□□□ -1.16
VRK1-207ENST00000557352 TAF1CQ15572 869 aaPredicted RBP7.8□□□□□ -1.16
VRK1-207ENST00000557352 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
VRK1-207ENST00000557352 ATG4DQ86TL0 474 aaPredicted RBP7.8□□□□□ -1.16
VRK1-207ENST00000557352 FAM161BQ96MY7 647 aa7.8□□□□□ -1.16
VRK1-207ENST00000557352 MIR1-1HGQ9H1L0 117 aa7.8□□□□□ -1.16
VRK1-207ENST00000557352 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms