RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 RNF186Q9NXI6 227 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 MYH8P13535 1937 aa15.07■□□□□ 0
SLIRP-209ENST00000557342 PHIPQ8WWQ0 1821 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 BAZ2AQ9UIF9 1905 aaKnown RBP15.06■□□□□ 0
SLIRP-209ENST00000557342 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
SLIRP-209ENST00000557342 ALDH1A1P00352 501 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 GJA5P36382 358 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 GTF2A2P52657 109 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 PDE1AP54750 535 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 PPIL2Q13356 520 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 PICK1Q9NRD5 415 aa15.06■□□□□ 0
SLIRP-209ENST00000557342 PCNTO95613 3336 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ -0
SLIRP-209ENST00000557342 RNF113AO15541 343 aaKnown RBP15.05■□□□□ -0
SLIRP-209ENST00000557342 TRPA1O75762 1119 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 LBX1P52954 281 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 TTC6Q86TZ1 520 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 LCORLQ8N3X6 602 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 CRACR2BQ8N4Y2 399 aaPredicted RBP15.05■□□□□ -0
SLIRP-209ENST00000557342 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
SLIRP-209ENST00000557342 PALD1Q9ULE6 856 aa15.05■□□□□ -0
SLIRP-209ENST00000557342 PTPRFP10586 1907 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 MBD4O95243 580 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
SLIRP-209ENST00000557342 IFNL1Q8IU54 200 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 APPBP2Q92624 585 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 MS4A4AQ96JQ5 239 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 FSD1Q9BTV5 496 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 ARMT1Q9H993 441 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 ATP8A2Q9NTI2 1148 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 CASP8AP2Q9UKL3 1982 aa15.04■□□□□ -0
SLIRP-209ENST00000557342 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
SLIRP-209ENST00000557342 CETPP11597 493 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 SNAPC2Q13487 334 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 SLFNL1Q499Z3 407 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 EVI5LQ96CN4 794 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 EHD4Q9H223 541 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 TSKSQ9UJT2 592 aa15.03■□□□□ -0
SLIRP-209ENST00000557342 CCL15-CCL14A0A0B4J2E2 113 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 FAM196BA6NMK8 535 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 IRF6O14896 467 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 SLURP2P0DP57 97 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 PTPRAP18433 802 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 CAP2P40123 477 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 CCL15Q16663 113 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 TICAM2Q86XR7 235 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 SDR42E1Q8WUS8 393 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 CFHR5Q9BXR6 569 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
SLIRP-209ENST00000557342 OSBPL3Q9H4L5 887 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 DCP1AQ9NPI6 582 aaPredicted RBP15.02■□□□□ -0
SLIRP-209ENST00000557342 GINM1Q9NU53 330 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 MCM9Q9NXL9 1143 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 SERPINB13Q9UIV8 391 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
SLIRP-209ENST00000557342 CXCL11O14625 94 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 CHGBP05060 677 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 ZCCHC17Q9NP64 241 aaKnown RBP15.01□□□□□ -0.01
SLIRP-209ENST00000557342 KCNH4Q9UQ05 1017 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 SLC4A4Q9Y6R1 1079 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 ZHX2Q9Y6X8 837 aa15.01□□□□□ -0.01
SLIRP-209ENST00000557342 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
SLIRP-209ENST00000557342 ASNSP08243 561 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 GNAT2P19087 354 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 SLC4A8Q2Y0W8 1093 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
SLIRP-209ENST00000557342 BRI3BPQ8WY22 251 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 OSBP2Q969R2 916 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 STRBPQ96SI9 672 aaKnown RBP15□□□□□ -0.01
SLIRP-209ENST00000557342 DNAJC18Q9H819 358 aa15□□□□□ -0.01
SLIRP-209ENST00000557342 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 GPAA1O43292 621 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 PRKAB2O43741 272 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 TBC1D8O95759 1140 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 PLCD1P51178 756 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 COL13A1Q5TAT6 717 aaPredicted RBP14.99□□□□□ -0.01
SLIRP-209ENST00000557342 GIMAP6Q6P9H5 292 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 PTPN18Q99952 460 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 AS3MTQ9HBK9 375 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
SLIRP-209ENST00000557342 USP17L5A8MUK1 530 aa14.98□□□□□ -0.01
SLIRP-209ENST00000557342 ZMYM1Q5SVZ6 1142 aa14.98□□□□□ -0.01
SLIRP-209ENST00000557342 TATDN1Q6P1N9 297 aa14.98□□□□□ -0.01
SLIRP-209ENST00000557342 FASTKD5Q7L8L6 764 aaKnown RBP14.98□□□□□ -0.01
SLIRP-209ENST00000557342 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-209ENST00000557342 SWAP70Q9UH65 585 aa14.98□□□□□ -0.01
SLIRP-209ENST00000557342 LOC285556D6RIA3 1793 aa14.98□□□□□ -0.01
SLIRP-209ENST00000557342 M0R2C6 588 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 GPR25O00155 361 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 GABPAQ06546 454 aa14.97□□□□□ -0.01
SLIRP-209ENST00000557342 RRP1BQ14684 758 aaKnown RBP14.97□□□□□ -0.01
SLIRP-209ENST00000557342 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms