RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	PSMC4	P43686	418 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MVP	Q14764	893 aa	Known RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MTFR1	Q15390	333 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ATF7IP	Q6VMQ6	1270 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	CCDC84	Q86UT8	332 aa	Predicted RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	DZIP1	Q86YF9	867 aa	Known RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ZGPAT	Q8N5A5	531 aa	Known RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	EFCAB3	Q8N7B9	438 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	NSUN4	Q96CB9	384 aa	Known RBP	13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SRRD	Q9UH36	339 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	AKAP2	Q9Y2D5	859 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ZHX2	Q9Y6X8	837 aa		13.82	□□□□□ -0.2
HNRNPC-231	ENST00000557336	GNRH1	P01148	92 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	GNAI2	P04899	355 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	C7	P10643	843 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ARID4A	P29374	1257 aa	Predicted RBP	13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	RRP1B	Q14684	758 aa	Known RBP	13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	NBPF11	Q86T75	865 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SPATA5	Q8NB90	893 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	CLUAP1	Q96AJ1	413 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SHISA4	Q96DD7	197 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	NEUROD6	Q96NK8	337 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	STK24	Q9Y6E0	443 aa		13.81	□□□□□ -0.2
HNRNPC-231	ENST00000557336	FAM196B	A6NMK8	535 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	MCAM	P43121	646 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PRMT2	P55345	433 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PICALM	Q13492	652 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	KIF22	Q14807	665 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ERICH6	Q7L0X2	663 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	TMEM57	Q8N5G2	664 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	FRAT1	Q92837	279 aa	Predicted RBP	13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	AK9	Q5TCS8	1911 aa		13.8	□□□□□ -0.2
HNRNPC-231	ENST00000557336	IPO8	O15397	1037 aa	Known RBP	13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	TBC1D12	O60347	775 aa		13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	CTNND1	O60716	968 aa	Known RBP	13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	IRX5	P78411	483 aa	Predicted RBP	13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	HABP4	Q5JVS0	413 aa	Known RBP	13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	GABRQ	Q9UN88	632 aa		13.79	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PHIP	Q8WWQ0	1821 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	DOCK2	Q92608	1830 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	TRIOBP	Q9H2D6	2365 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	FMNL1	O95466	1100 aa	Predicted RBP	13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SLC4A8	Q2Y0W8	1093 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	UBE2Q1	Q7Z7E8	422 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	SLF2	Q8IX21	1173 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PARK7	Q99497	189 aa	Known RBP	13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PICK1	Q9NRD5	415 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	PCDH10	Q9P2E7	1040 aa		13.78	□□□□□ -0.2
HNRNPC-231	ENST00000557336	TRIM75P	A6NK02	468 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GRK4	P32298	578 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	JAG1	P78504	1218 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PRKCZ	Q05513	592 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TREML2	Q5T2D2	321 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GADL1	Q6ZQY3	521 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FASTKD5	Q7L8L6	764 aa	Known RBP	13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ADGRA1	Q86SQ6	560 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SSH3	Q8TE77	659 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SNRK	Q9NRH2	765 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SLC45A1	Q9Y2W3	748 aa		13.77	□□□□□ -0.21
HNRNPC-231	ENST00000557336	COL2A1	P02458	1487 aa	Predicted RBP	13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	MYPN	Q86TC9	1320 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	RLBP1	P12271	317 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ATP8B2	P98198	1209 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TNNI3K	Q59H18	835 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	IER5L	Q5T953	404 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	DBNDD2	Q9BQY9	259 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GPR108	Q9NPR9	543 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	RAI14	Q9P0K7	980 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FPGT-TNNI3K	V9GXZ4	949 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PTPRF	P10586	1907 aa		13.76	□□□□□ -0.21
HNRNPC-231	ENST00000557336	LAMA3	Q16787	3333 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	MAP4K4	O95819	1239 aa	Predicted RBP	13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	CYP2E1	P05181	493 aa	Predicted RBP	13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	CCL5	P13501	91 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GORAB	Q5T7V8	394 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ZKSCAN2	Q63HK3	967 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	RAET1E	Q8TD07	263 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GCC1	Q96CN9	775 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	C1orf115	Q9H7X2	142 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	DNAJC18	Q9H819	358 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	AGTPBP1	Q9UPW5	1226 aa		13.75	□□□□□ -0.21
HNRNPC-231	ENST00000557336	DOCK1	Q14185	1865 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336		H0YGN5	161 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ZBTB7B	O15156	539 aa	Predicted RBP	13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	LDHC	P07864	332 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GJB1	P08034	283 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	UQCRFS1P1	P0C7P4	283 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	HOXD10	P28358	340 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	CAP2	P40123	477 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	GJA8	P48165	433 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FLT3LG	P49771	235 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FCGRT	P55899	365 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PPP4C	P60510	307 aa		13.74	□□□□□ -0.21

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