RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 VPS33BQ9H267 617 aa9.05□□□□□ -0.96
LINC00640-204ENST00000557295 EGFL7Q9UHF1 273 aa9.05□□□□□ -0.96
LINC00640-204ENST00000557295 NIP7Q9Y221 180 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00640-204ENST00000557295 CDHR2Q9BYE9 1310 aa9.05□□□□□ -0.96
LINC00640-204ENST00000557295 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 CDC37L1Q7L3B6 337 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 MEIOBQ8N635 442 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
LINC00640-204ENST00000557295 DACH1Q9UI36 760 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
LINC00640-204ENST00000557295 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
LINC00640-204ENST00000557295 EPHA4P54764 986 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 FOXK2Q01167 660 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
LINC00640-204ENST00000557295 ZNRF3Q9ULT6 936 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 USP16Q9Y5T5 823 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 SCN11AQ9UI33 1791 aa9.03□□□□□ -0.96
LINC00640-204ENST00000557295 CEMIPQ8WUJ3 1361 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 NPC1L1Q9UHC9 1359 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 NOS2P35228 1153 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 GMPSP49915 693 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-204ENST00000557295 HIRAP54198 1017 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-204ENST00000557295 HUNKP57058 714 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 CXCL9Q07325 125 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 CTU1Q7Z7A3 348 aaKnown RBP9.02□□□□□ -0.97
LINC00640-204ENST00000557295 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 KDF1Q8NAX2 398 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-204ENST00000557295 CRAMP1Q96RY5 1269 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 POLR3GLQ9BT43 218 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-204ENST00000557295 NYXQ9GZU5 481 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 ZNF408Q9H9D4 720 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 RNF186Q9NXI6 227 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 HCN4Q9Y3Q4 1203 aa9.02□□□□□ -0.97
LINC00640-204ENST00000557295 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 ARFGEF2Q9Y6D5 1785 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 BTBD11A6QL63 1104 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 PPIP5K2O43314 1243 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 KCNQ3O43525 872 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 ICMTO60725 284 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 FAM13AO94988 1023 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 SNRPA1P09661 255 aaKnown RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 GPC1P35052 558 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 PIP4K2AP48426 406 aaPredicted RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 KIF23Q02241 960 aaPredicted RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 PKN2Q16513 984 aaKnown RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 CCDC88AQ3V6T2 1871 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 RIC1Q4ADV7 1423 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 RHBDD1Q8TEB9 315 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 RPGRQ92834 1020 aaKnown RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
LINC00640-204ENST00000557295 DNMT3AQ9Y6K1 912 aaPredicted RBP9.01□□□□□ -0.97
LINC00640-204ENST00000557295 ABCC12Q96J65 1359 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 BCORQ6W2J9 1755 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 TRPA1O75762 1119 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 MTMR3Q13615 1198 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 TEAD4Q15561 434 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 HLFQ16534 295 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 AOC3Q16853 763 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
LINC00640-204ENST00000557295 HELQQ8TDG4 1101 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 RBM17Q96I25 401 aaKnown RBP9□□□□□ -0.97
LINC00640-204ENST00000557295 RTFDC1Q9BY42 306 aaPredicted RBP9□□□□□ -0.97
LINC00640-204ENST00000557295 KNSTRNQ9Y448 316 aa9□□□□□ -0.97
LINC00640-204ENST00000557295 PDE4DIPQ5VU43 2346 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 PRAMEF22A3QJZ6 481 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 SPINT1O43278 529 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 TNIP1Q15025 636 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 HABP4Q5JVS0 413 aaKnown RBP8.99□□□□□ -0.97
LINC00640-204ENST00000557295 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 SLC51AQ86UW1 340 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 SUPT20HQ8NEM7 779 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
LINC00640-204ENST00000557295 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
LINC00640-204ENST00000557295 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
LINC00640-204ENST00000557295 ERVV-1B6SEH8 477 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 MAPK1P28482 360 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 PHKA2P46019 1235 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
LINC00640-204ENST00000557295 ZNF157P51786 506 aaPredicted RBP8.98□□□□□ -0.97
LINC00640-204ENST00000557295 KIAA2012Q0VF49 1180 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
LINC00640-204ENST00000557295 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 ALDH16A1Q8IZ83 802 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 C2orf69Q8N8R5 385 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 CSRNP1Q96S65 589 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 BCL2L13Q9BXK5 485 aa8.98□□□□□ -0.97
LINC00640-204ENST00000557295 TMX4Q9H1E5 349 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms