RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PDCL2Q8N4E4 241 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 EEF2KMTQ96G04 330 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 POLR3EQ9NVU0 708 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 LMO7Q8WWI1 1683 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 DCCP43146 1447 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 TRIM75PA6NK02 468 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 IGSF3O75054 1194 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 GRIN1Q05586 938 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 DIXDC1Q155Q3 683 aa17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
TMEM55B-207ENST00000557041 CMA1P23946 247 aa17.58■□□□□ 0.41
TMEM55B-207ENST00000557041 FANCCQ00597 558 aa17.58■□□□□ 0.41
TMEM55B-207ENST00000557041 PPP4R3BQ5MIZ7 849 aa17.58■□□□□ 0.41
TMEM55B-207ENST00000557041 PIK3AP1Q6ZUJ8 805 aa17.58■□□□□ 0.41
TMEM55B-207ENST00000557041 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.41
TMEM55B-207ENST00000557041 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
TMEM55B-207ENST00000557041 EVX2Q03828 476 aa17.58■□□□□ 0.4
TMEM55B-207ENST00000557041 TMTC2Q8N394 836 aa17.58■□□□□ 0.4
TMEM55B-207ENST00000557041 PRIMPOLQ96LW4 560 aa17.58■□□□□ 0.4
TMEM55B-207ENST00000557041 USP27XA6NNY8 438 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 DEXIO95424 95 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 LRRC8AQ8IWT6 810 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 MYRIPQ8NFW9 859 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 RPGRQ92834 1020 aaKnown RBP17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 PICALMQ13492 652 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 KAT14Q9H8E8 782 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 TOM1O60784 492 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 EIF6P56537 245 aaKnown RBP17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 SMYD4Q8IYR2 804 aaPredicted RBP17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 RASGRP4Q8TDF6 673 aa17.57■□□□□ 0.4
TMEM55B-207ENST00000557041 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 GOLGA8HP0CJ92 632 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 PDE4BQ07343 736 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 IQCB1Q15051 598 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 USP49Q70CQ1 688 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 DYNLL2Q96FJ2 89 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 NLRP12P59046 1061 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 SHC4Q6S5L8 630 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 TGFBRAP1Q8WUH2 860 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 MARF1Q9Y4F3 1742 aaKnown RBP17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 SYT10Q6XYQ8 523 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 LINC00116Q8NCU8 138 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 PCMTD1Q96MG8 357 aaPredicted RBP17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 BLZF1Q9H2G9 400 aa17.56■□□□□ 0.4
TMEM55B-207ENST00000557041 NTSR2O95665 410 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 TFAP4Q01664 338 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 ZSCAN10Q96SZ4 725 aaPredicted RBP17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 MROH7-TTC4A0A0A0MT08 1334 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 MYL5Q02045 173 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 MECOMQ03112 1051 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 DHX40Q8IX18 779 aaKnown RBP17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 ENGASEQ8NFI3 743 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 EPSTI1Q96J88 318 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 FAM84BQ96KN1 310 aaPredicted RBP17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 ZSWIM4Q9H7M6 989 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 NFE2L3Q9Y4A8 694 aa17.55■□□□□ 0.4
TMEM55B-207ENST00000557041 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 LDHBP07195 334 aaKnown RBP17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 KIF18AQ8NI77 898 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 KRT2P35908 639 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 CRACR2BQ8N4Y2 399 aaPredicted RBP17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 BCL9O00512 1426 aa17.54■□□□□ 0.4
TMEM55B-207ENST00000557041 RILPL1Q5EBL4 403 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 SLC44A5Q8NCS7 719 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 MNS1Q8NEH6 495 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 IFNAR1P17181 557 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 PLA2G4DQ86XP0 818 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 USP21Q9UK80 565 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 CCDC194A0A1B0GVG4 234 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 CUTAO60888 179 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 FGFR2P21802 821 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 FAM196AQ6ZSG2 479 aa17.53■□□□□ 0.4
TMEM55B-207ENST00000557041 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 TCRBV5S4A2TA0A5A2 114 aa17.52■□□□□ 0.4
TMEM55B-207ENST00000557041 MMP1P03956 469 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms