RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SPP2Q13103 211 aa15.83■□□□□ 0.12
PSEN1-220ENST00000557037 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
PSEN1-220ENST00000557037 CCDC85BQ15834 202 aaPredicted RBP15.83■□□□□ 0.12
PSEN1-220ENST00000557037 SH3BP5LQ7L8J4 393 aa15.83■□□□□ 0.12
PSEN1-220ENST00000557037 ALYREFQ86V81 257 aaKnown RBP15.83■□□□□ 0.12
PSEN1-220ENST00000557037 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
PSEN1-220ENST00000557037 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
PSEN1-220ENST00000557037 FRMPD3Q5JV73 1810 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 DOCK2Q92608 1830 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 DNAJB2P25686 324 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 FLIIQ13045 1269 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
PSEN1-220ENST00000557037 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 SNX27Q96L92 541 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 LRFN3Q9BTN0 628 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 ZNF576Q9H609 170 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 MORF4L1Q9UBU8 362 aa15.82■□□□□ 0.12
PSEN1-220ENST00000557037 ARIH1Q9Y4X5 557 aaPredicted RBP15.82■□□□□ 0.12
PSEN1-220ENST00000557037 TRIM43BA6NCK2 446 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 RGS2P41220 211 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 EPHB4P54760 987 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 WDR43Q15061 677 aaKnown RBP eCLIP15.81■□□□□ 0.12
PSEN1-220ENST00000557037 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 USP6NLQ92738 828 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 TRIM43Q96BQ3 446 aaPredicted RBP15.81■□□□□ 0.12
PSEN1-220ENST00000557037 GAS2L1Q99501 681 aaPredicted RBP15.81■□□□□ 0.12
PSEN1-220ENST00000557037 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
PSEN1-220ENST00000557037 ADAMTS8Q9UP79 889 aa15.81■□□□□ 0.12
PSEN1-220ENST00000557037 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
PSEN1-220ENST00000557037 DDTLA6NHG4 134 aaPredicted RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 CNGA1P29973 690 aa15.8■□□□□ 0.12
PSEN1-220ENST00000557037 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 METTL24Q5JXM2 366 aa15.8■□□□□ 0.12
PSEN1-220ENST00000557037 GJC2Q5T442 439 aaPredicted RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 GPRC5AQ8NFJ5 357 aa15.8■□□□□ 0.12
PSEN1-220ENST00000557037 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
PSEN1-220ENST00000557037 DDX20Q9UHI6 824 aaKnown RBP15.8■□□□□ 0.12
PSEN1-220ENST00000557037 FAM196BA6NMK8 535 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 DNM1LO00429 736 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 IRX3P78415 501 aaPredicted RBP15.79■□□□□ 0.12
PSEN1-220ENST00000557037 MAP3K10Q02779 954 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 SLC39A5Q6ZMH5 540 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
PSEN1-220ENST00000557037 ZNF280CQ8ND82 737 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 P2RX7Q99572 595 aaKnown RBP15.79■□□□□ 0.12
PSEN1-220ENST00000557037 PORCNQ9H237 461 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 PRDM12Q9H4Q4 367 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 EPHX3Q9H6B9 360 aa15.79■□□□□ 0.12
PSEN1-220ENST00000557037 CACNA1AO00555 2505 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 LOC285556D6RIA3 1793 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 F6X3S4 739 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 ENTPD3O75355 529 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 PRDX5P30044 214 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 MORN1Q5T089 497 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 LPAR1Q92633 364 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 APBA2Q99767 749 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 FLRT1Q9NZU1 646 aa15.78■□□□□ 0.12
PSEN1-220ENST00000557037 RLFQ13129 1914 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
PSEN1-220ENST00000557037 ITGB8P26012 769 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 MAPK4P31152 587 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 PICALMQ13492 652 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 MFSD14CQ5VZR4 134 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 GPR142Q7Z601 462 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 PLEKHH3Q7Z736 793 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 NDUFB9Q9Y6M9 179 aa15.77■□□□□ 0.12
PSEN1-220ENST00000557037 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-220ENST00000557037 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-220ENST00000557037 APAF1O14727 1248 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
PSEN1-220ENST00000557037 Q3C1V9 767 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 BEND3Q5T5X7 828 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 IDI2Q9BXS1 227 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 CWC22Q9HCG8 908 aaKnown RBP15.76■□□□□ 0.11
PSEN1-220ENST00000557037 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
PSEN1-220ENST00000557037 GRM8O00222 908 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 LDHBP07195 334 aaKnown RBP15.75■□□□□ 0.11
PSEN1-220ENST00000557037 IGFBP4P22692 258 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 HERVK_113P62684 666 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 TMEM31Q5JXX7 168 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 VGLL2Q8N8G2 317 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
PSEN1-220ENST00000557037 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
PSEN1-220ENST00000557037 PDE8BO95263 885 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 BMP1P13497 986 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 PBX2P40425 430 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 ERVK-9P63128 1117 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 ERVK-24P63145 666 aa15.74■□□□□ 0.11
PSEN1-220ENST00000557037 TLE2Q04725 743 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms