RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 CAPNS2Q96L46 248 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
HNRNPC-228ENST00000557033 RNF40O75150 1001 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 DKK1O94907 266 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 IL1R1P14778 569 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 KLRK1P26718 216 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 GTF2IP78347 998 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 PTPRNQ16849 979 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 C2orf69Q8N8R5 385 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 BICC1Q9H694 974 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 GGA3Q9NZ52 723 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 HDAC9Q9UKV0 1011 aa12.29□□□□□ -0.44
HNRNPC-228ENST00000557033 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 FOXN1O15353 648 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 PLIN1O60240 522 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 FKBP1AP62942 108 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 TSGA10IPQ3SY00 556 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 API5Q9BZZ5 524 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 RIPOR2Q9Y4F9 1068 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
HNRNPC-228ENST00000557033 SNAP23O00161 211 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 WNT10BO00744 389 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 SASH1O94885 1247 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 HUNKP57058 714 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 ASTN2O75129 1339 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-228ENST00000557033 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 ZNF646O15015 1829 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 JUNDP17535 347 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 FKBP1BP68106 108 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 NOGQ13253 232 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 GRM1Q13255 1194 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 ARHGAP45Q92619 1136 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 NOD1Q9Y239 953 aa12.26□□□□□ -0.45
HNRNPC-228ENST00000557033 CA12O43570 354 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 PRMT3O60678 531 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 ICMTO60725 284 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 PDE8BO95263 885 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 CTHP32929 405 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 OCLNQ16625 522 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 TDRD7Q8NHU6 1098 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 CXXC1Q9P0U4 656 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
HNRNPC-228ENST00000557033 AOC2O75106 756 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 ABL1P00519 1130 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 POTEHQ6S545 545 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 SIX5Q8N196 739 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 ZBED3Q96IU2 234 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 DRC1Q96MC2 740 aa12.24□□□□□ -0.45
HNRNPC-228ENST00000557033 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-228ENST00000557033 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms