RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 DNAJC18Q9H819 358 aa17.05■□□□□ 0.32
CIPC-207ENST00000556863 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
CIPC-207ENST00000556863 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
CIPC-207ENST00000556863 PPARAQ07869 468 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 MOB2Q70IA6 237 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 SLC44A5Q8NCS7 719 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 NBPF3Q9H094 633 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
CIPC-207ENST00000556863 ROBO3Q96MS0 1386 aa17.03■□□□□ 0.32
CIPC-207ENST00000556863 CELF2O95319 508 aaKnown RBP17.03■□□□□ 0.32
CIPC-207ENST00000556863 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
CIPC-207ENST00000556863 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
CIPC-207ENST00000556863 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
CIPC-207ENST00000556863 TAF6LQ9Y6J9 622 aa17.03■□□□□ 0.32
CIPC-207ENST00000556863 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
CIPC-207ENST00000556863 DOCK1Q14185 1865 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 REC8O95072 547 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 NF2P35240 595 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 GABPAQ06546 454 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 FSTL1Q12841 308 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 CST9Q5W186 159 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 EHD4Q9H223 541 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.32
CIPC-207ENST00000556863 INCENPQ9NQS7 918 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
CIPC-207ENST00000556863 USP2O75604 605 aaPredicted RBP17.01■□□□□ 0.31
CIPC-207ENST00000556863 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
CIPC-207ENST00000556863 RRP1BQ14684 758 aaKnown RBP17.01■□□□□ 0.31
CIPC-207ENST00000556863 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
CIPC-207ENST00000556863 C16orf86Q6ZW13 317 aa17.01■□□□□ 0.31
CIPC-207ENST00000556863 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
CIPC-207ENST00000556863 CTNNA3Q9UI47 895 aa17.01■□□□□ 0.31
CIPC-207ENST00000556863 ZNF213O14771 459 aa17■□□□□ 0.31
CIPC-207ENST00000556863 PRDM1O75626 825 aa17■□□□□ 0.31
CIPC-207ENST00000556863 CYP21A2P08686 494 aa17■□□□□ 0.31
CIPC-207ENST00000556863 SHMT1P34896 483 aa17■□□□□ 0.31
CIPC-207ENST00000556863 CDK8P49336 464 aa17■□□□□ 0.31
CIPC-207ENST00000556863 MAP3K10Q02779 954 aa17■□□□□ 0.31
CIPC-207ENST00000556863 IMMTQ16891 758 aaKnown RBP17■□□□□ 0.31
CIPC-207ENST00000556863 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
CIPC-207ENST00000556863 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
CIPC-207ENST00000556863 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
CIPC-207ENST00000556863 FOXP4Q8IVH2 680 aaPredicted RBP17■□□□□ 0.31
CIPC-207ENST00000556863 HOOK2Q96ED9 719 aa17■□□□□ 0.31
CIPC-207ENST00000556863 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
CIPC-207ENST00000556863 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
CIPC-207ENST00000556863 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
CIPC-207ENST00000556863 HERC5Q9UII4 1024 aaKnown RBP17■□□□□ 0.31
CIPC-207ENST00000556863 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
CIPC-207ENST00000556863 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
CIPC-207ENST00000556863 SLC27A2O14975 620 aa16.99■□□□□ 0.31
CIPC-207ENST00000556863 TBC1D12O60347 775 aa16.99■□□□□ 0.31
CIPC-207ENST00000556863 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
CIPC-207ENST00000556863 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
CIPC-207ENST00000556863 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
CIPC-207ENST00000556863 NEDD4P46934 1319 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 UBE2Q2LH0YL09 131 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
CIPC-207ENST00000556863 GDF11O95390 407 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 INPP5BP32019 993 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 JAG1P78504 1218 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 NKX2-3Q8TAU0 364 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
CIPC-207ENST00000556863 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
CIPC-207ENST00000556863 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
CIPC-207ENST00000556863 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
CIPC-207ENST00000556863 TATDN1Q6P1N9 297 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 C2orf69Q8N8R5 385 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
CIPC-207ENST00000556863 STAG1Q8WVM7 1258 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
CIPC-207ENST00000556863 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
CIPC-207ENST00000556863 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
CIPC-207ENST00000556863 AKR1B1P15121 316 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 RASA1P20936 1047 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 HSPA4P34932 840 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 IREB2P48200 963 aaKnown RBP16.96■□□□□ 0.31
CIPC-207ENST00000556863 PDE4BQ07343 736 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
CIPC-207ENST00000556863 AKNAD1Q5T1N1 836 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 CLMNQ96JQ2 1002 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 TOMM22Q9NS69 142 aa16.96■□□□□ 0.31
CIPC-207ENST00000556863 E7EWF7 191 aa16.95■□□□□ 0.3
CIPC-207ENST00000556863 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
CIPC-207ENST00000556863 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
CIPC-207ENST00000556863 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms