RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 GTF2A2P52657 109 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 MAP3K10Q02779 954 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 PPATQ06203 517 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
SNX6-208ENST00000556712 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
SNX6-208ENST00000556712 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
SNX6-208ENST00000556712 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 DNAJC18Q9H819 358 aa12.57□□□□□ -0.4
SNX6-208ENST00000556712 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 MBD4O95243 580 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 INHBEP58166 350 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 EVX2Q03828 476 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 CRHR2Q13324 411 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 ANKRD45Q5TZF3 282 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 PI4K2BQ8TCG2 481 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 SDR42E1Q8WUS8 393 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 ZNF296Q8WUU4 475 aaPredicted RBP12.56□□□□□ -0.4
SNX6-208ENST00000556712 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 MYH8P13535 1937 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 SALL3Q9BXA9 1300 aa12.56□□□□□ -0.4
SNX6-208ENST00000556712 BTBD19C9JJ37 291 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 GPR25O00155 361 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 TBC1D12O60347 775 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
SNX6-208ENST00000556712 GDF11O95390 407 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 IGHDP01880 384 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 PTPRAP18433 802 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 MX1P20591 662 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 DGKZQ13574 1117 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
SNX6-208ENST00000556712 CFHR5Q9BXR6 569 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX6-208ENST00000556712 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 DHX36Q9H2U1 1008 aaKnown RBP12.55□□□□□ -0.4
SNX6-208ENST00000556712 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
SNX6-208ENST00000556712 PRKAB2O43741 272 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 HLA-DOAP06340 250 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 CETPP11597 493 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 JAG1P78504 1218 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 TAF1CQ15572 869 aaPredicted RBP12.54□□□□□ -0.4
SNX6-208ENST00000556712 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
SNX6-208ENST00000556712 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
SNX6-208ENST00000556712 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
SNX6-208ENST00000556712 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
SNX6-208ENST00000556712 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 CYP2D6P10635 497 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 AAMPQ13685 434 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 MOGSQ13724 837 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 PUS7LQ9H0K6 701 aaKnown RBP12.53□□□□□ -0.4
SNX6-208ENST00000556712 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
SNX6-208ENST00000556712 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
SNX6-208ENST00000556712 A0A0G2JLL6 359 aaPredicted RBP12.52□□□□□ -0.41
SNX6-208ENST00000556712 FKTNO75072 461 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 CAP2P40123 477 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 PLCD1P51178 756 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 UBE3CQ15386 1083 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 PRRT2Q7Z6L0 340 aaPredicted RBP12.52□□□□□ -0.41
SNX6-208ENST00000556712 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.41
SNX6-208ENST00000556712 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 ABHD8Q96I13 439 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
SNX6-208ENST00000556712 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.41
SNX6-208ENST00000556712 MCM9Q9NXL9 1143 aa12.52□□□□□ -0.41
SNX6-208ENST00000556712 SMIM22K7EJ46 135 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 ERC2O15083 957 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
SNX6-208ENST00000556712 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
SNX6-208ENST00000556712 CAP1Q01518 475 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 CTU1Q7Z7A3 348 aaKnown RBP12.51□□□□□ -0.41
SNX6-208ENST00000556712 CD99L2Q8TCZ2 262 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
SNX6-208ENST00000556712 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 M0R2C6 588 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 PDHXO00330 501 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 CXCL11O14625 94 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 RNF113AO15541 343 aaKnown RBP12.5□□□□□ -0.41
SNX6-208ENST00000556712 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
SNX6-208ENST00000556712 SHMT1P34896 483 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 PDE1AP54750 535 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
SNX6-208ENST00000556712 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 ANKRD23Q86SG2 305 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms