RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 MKRN3Q13064 507 aaKnown RBP29.57■■■□□ 2.32
SDR39U1-221ENST00000556707 TICAM2Q86XR7 235 aa29.57■■■□□ 2.32
SDR39U1-221ENST00000556707 DCP1AQ9NPI6 582 aaPredicted RBP29.57■■■□□ 2.32
SDR39U1-221ENST00000556707 FAM196BA6NMK8 535 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 PRKAB2O43741 272 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 ZMYM1Q5SVZ6 1142 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 NOL9Q5SY16 702 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 METTL16Q86W50 562 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 FOXP4Q8IVH2 680 aaPredicted RBP29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 OPTNQ96CV9 577 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 STRBPQ96SI9 672 aaKnown RBP29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 ATP8A2Q9NTI2 1148 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 ATAD5Q96QE3 1844 aa29.56■■■□□ 2.32
SDR39U1-221ENST00000556707 GJA5P36382 358 aa29.55■■■□□ 2.32
SDR39U1-221ENST00000556707 REM2Q8IYK8 340 aaPredicted RBP29.55■■■□□ 2.32
SDR39U1-221ENST00000556707 SPDYE5A6NIY4 337 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 M0R2C6 588 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 HSPA1AP0DMV8 641 aaKnown RBP29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 HSPA1BP0DMV9 641 aaKnown RBP29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 TTC6Q86TZ1 520 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 ERO1BQ86YB8 467 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 CNKSR2Q8WXI2 1034 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 RILPL2Q969X0 211 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 CCDC136Q96JN2 1154 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 MCM9Q9NXL9 1143 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 SLC4A4Q9Y6R1 1079 aa29.54■■■□□ 2.32
SDR39U1-221ENST00000556707 GPAA1O43292 621 aa29.53■■■□□ 2.32
SDR39U1-221ENST00000556707 CTNND1O60716 968 aaKnown RBP29.53■■■□□ 2.32
SDR39U1-221ENST00000556707 SLC4A8Q2Y0W8 1093 aa29.53■■■□□ 2.32
SDR39U1-221ENST00000556707 CRACR2BQ8N4Y2 399 aaPredicted RBP29.53■■■□□ 2.32
SDR39U1-221ENST00000556707 POLR3DP05423 398 aaPredicted RBP29.52■■■□□ 2.32
SDR39U1-221ENST00000556707 SEC62Q99442 399 aaKnown RBP29.52■■■□□ 2.32
SDR39U1-221ENST00000556707 TRIM34Q9BYJ4 488 aa29.52■■■□□ 2.32
SDR39U1-221ENST00000556707 EHD4Q9H223 541 aa29.52■■■□□ 2.32
SDR39U1-221ENST00000556707 DNAJC18Q9H819 358 aa29.52■■■□□ 2.32
SDR39U1-221ENST00000556707 SCYL3Q8IZE3 742 aa29.51■■■□□ 2.31
SDR39U1-221ENST00000556707 OTUD5Q96G74 571 aa29.51■■■□□ 2.31
SDR39U1-221ENST00000556707 DDRGK1Q96HY6 314 aa29.51■■■□□ 2.31
SDR39U1-221ENST00000556707 BEGAINQ9BUH8 593 aa29.51■■■□□ 2.31
SDR39U1-221ENST00000556707 MYH8P13535 1937 aa29.51■■■□□ 2.31
SDR39U1-221ENST00000556707 PHIPQ8WWQ0 1821 aa29.5■■■□□ 2.31
SDR39U1-221ENST00000556707 MANSC4A6NHS7 340 aaPredicted RBP29.5■■■□□ 2.31
SDR39U1-221ENST00000556707 PLCD1P51178 756 aa29.5■■■□□ 2.31
SDR39U1-221ENST00000556707 TTC22Q5TAA0 569 aa29.5■■■□□ 2.31
SDR39U1-221ENST00000556707 SERPINB13Q9UIV8 391 aa29.5■■■□□ 2.31
SDR39U1-221ENST00000556707 GNAT2P19087 354 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 TM4SF4P48230 202 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 PPATQ06203 517 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 SREBF2Q12772 1141 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 PPIL2Q13356 520 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 ERICH6BQ5W0A0 696 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 PICK1Q9NRD5 415 aa29.49■■■□□ 2.31
SDR39U1-221ENST00000556707 GSG1L2A8MUP6 293 aa29.48■■■□□ 2.31
SDR39U1-221ENST00000556707 CAP2P40123 477 aa29.48■■■□□ 2.31
SDR39U1-221ENST00000556707 GIMAP6Q6P9H5 292 aa29.48■■■□□ 2.31
SDR39U1-221ENST00000556707 INHBEP58166 350 aa29.47■■■□□ 2.31
SDR39U1-221ENST00000556707 RRP1BQ14684 758 aaKnown RBP29.47■■■□□ 2.31
SDR39U1-221ENST00000556707 HELLSQ9NRZ9 838 aa29.47■■■□□ 2.31
SDR39U1-221ENST00000556707 PTPRFP10586 1907 aa29.47■■■□□ 2.31
SDR39U1-221ENST00000556707 CYP2D6P10635 497 aa29.46■■■□□ 2.31
SDR39U1-221ENST00000556707 GSPT1P15170 499 aaKnown RBP29.46■■■□□ 2.31
SDR39U1-221ENST00000556707 PTPRAP18433 802 aa29.46■■■□□ 2.31
SDR39U1-221ENST00000556707 MS4A4AQ96JQ5 239 aa29.46■■■□□ 2.31
SDR39U1-221ENST00000556707 USP17L12C9JPN9 530 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 USP17L21D6R901 530 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 IRF6O14896 467 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 FOXN1O15353 648 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 CA12O43570 354 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 SDSP20132 328 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 GTF2A2P52657 109 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 GABPAQ06546 454 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 C12orf60Q5U649 245 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 AMOTL1Q8IY63 956 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 FAM227BQ96M60 508 aa29.45■■■□□ 2.31
SDR39U1-221ENST00000556707 A0A0D9SFI3 127 aa29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 PATL2C9JE40 543 aaKnown RBP29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 EVX2Q03828 476 aa29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 NMIQ13287 307 aaPredicted RBP29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 TATDN1Q6P1N9 297 aa29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 CCDC129Q6ZRS4 1044 aa29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 TAOK2Q9UL54 1235 aa29.44■■■□□ 2.3
SDR39U1-221ENST00000556707 TESPA1A2RU30 521 aaPredicted RBP29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 MCMDC2Q4G0Z9 681 aa29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 CTR9Q6PD62 1173 aa29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 EPB41L4AQ9HCS5 686 aaPredicted RBP29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 ARPP21Q9UBL0 812 aaPredicted RBP29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 KCNH4Q9UQ05 1017 aa29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 ZHX2Q9Y6X8 837 aa29.43■■■□□ 2.3
SDR39U1-221ENST00000556707 CYP2D7A0A087X1C5 515 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 HIP1O00291 1037 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 APPP05067 770 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 SNAPC2Q13487 334 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 SBK1Q52WX2 424 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 GINM1Q9NU53 330 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 RNF186Q9NXI6 227 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 SAGE1Q9NXZ1 904 aa29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.42■■■□□ 2.3
SDR39U1-221ENST00000556707 SHMT1P34896 483 aa29.41■■■□□ 2.3
SDR39U1-221ENST00000556707 CTCFP49711 727 aaPredicted RBP29.41■■■□□ 2.3
SDR39U1-221ENST00000556707 IFNL1Q8IU54 200 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms