RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 GNEQ9Y223 722 aaKnown RBP7.03□□□□□ -1.28
ATXN3-243ENST00000556671 LEMD3Q9Y2U8 911 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 KDM5CP41229 1560 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
ATXN3-243ENST00000556671 CLTCQ00610 1675 aaKnown RBP7.03□□□□□ -1.28
ATXN3-243ENST00000556671 KIAA1107Q9UPP5 1409 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 WNT11O96014 354 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 FOSL1P15407 271 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 ADMP35318 185 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 GRM2Q14416 872 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 AKAP4Q5JQC9 854 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 ZAR1Q86SH2 424 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
ATXN3-243ENST00000556671 GATA6Q92908 595 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 METTL22Q9BUU2 404 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-243ENST00000556671 ACSS3Q9H6R3 686 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 RAD18Q9NS91 495 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
ATXN3-243ENST00000556671 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 CCDC141Q6ZP82 1450 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-243ENST00000556671 AOC2O75106 756 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 IRAK1P51617 712 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 MAP7Q14244 749 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 MSMPQ1L6U9 139 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 TMC7Q7Z402 723 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 WDR18Q9BV38 432 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 SEMA6CQ9H3T2 930 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 FAM105AQ9NUU6 356 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 FGD6Q6ZV73 1430 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
ATXN3-243ENST00000556671 ARHGEF5Q12774 1597 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
ATXN3-243ENST00000556671 A2MP01023 1474 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 MBD5Q9P267 1494 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 NFICP08651 508 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 RAB6AP20340 208 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 DCTN4Q9UJW0 460 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 C3P01024 1663 aa7□□□□□ -1.29
ATXN3-243ENST00000556671 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
ATXN3-243ENST00000556671 BRD1O95696 1058 aa6.99□□□□□ -1.29
ATXN3-243ENST00000556671 ASPAP45381 313 aa6.99□□□□□ -1.29
ATXN3-243ENST00000556671 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
ATXN3-243ENST00000556671 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
ATXN3-243ENST00000556671 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
ATXN3-243ENST00000556671 CEP152O94986 1710 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 PTPRMP28827 1452 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-243ENST00000556671 DSC3Q14574 896 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 SEZ6L2Q6UXD5 910 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-243ENST00000556671 PPP1R9AQ9ULJ8 1098 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 RTEL1-TNFRSF6BF6WH68 1400 aa6.98□□□□□ -1.29
ATXN3-243ENST00000556671 DHX29Q7Z478 1369 aaKnown RBP6.97□□□□□ -1.29
ATXN3-243ENST00000556671 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 ABCC5O15440 1437 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 CYP26A1O43174 497 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 PRNPP04156 253 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 DAPK1P53355 1430 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 FCGRTP55899 365 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 PI16Q6UXB8 463 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 DTHD1Q6ZMT9 781 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 WDR89Q96FK6 387 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-243ENST00000556671 CCDC86Q9H6F5 360 aaKnown RBP6.97□□□□□ -1.29
ATXN3-243ENST00000556671 C1GALT1Q9NS00 363 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 NLRP2Q9NX02 1062 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
ATXN3-243ENST00000556671 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.29
ATXN3-243ENST00000556671 GSTP1P09211 210 aaKnown RBP6.96□□□□□ -1.3
ATXN3-243ENST00000556671 TAL1P17542 331 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-243ENST00000556671 LIG1P18858 919 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 HSPA2P54652 639 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 CYP27A1Q02318 531 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 BCO2Q9BYV7 579 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 KRT82Q9NSB4 513 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
ATXN3-243ENST00000556671 MAST1Q9Y2H9 1570 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 TREHO43280 583 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 PAX4O43316 350 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ZNF862O60290 1169 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 KIF4BQ2VIQ3 1234 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 DUSP27Q5VZP5 1158 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 VSIG10LQ86VR7 867 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ZC3H12CQ9C0D7 883 aaKnown RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 TMEM39AQ9NV64 488 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 PPP4R2Q9NY27 417 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ADGRE2Q9UHX3 823 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms