RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 TCF15Q12870 199 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 MFSD14BQ5SR56 506 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 CC2D1BQ5T0F9 858 aaKnown RBP5.54□□□□□ -1.52
ATXN3-242ENST00000556644 FASTKD5Q7L8L6 764 aaKnown RBP5.54□□□□□ -1.52
ATXN3-242ENST00000556644 PLBD2Q8NHP8 589 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
ATXN3-242ENST00000556644 HLA-CQ95604 372 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 NUDT12Q9BQG2 462 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 GREM2Q9H772 168 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 CHPF2Q9P2E5 772 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
ATXN3-242ENST00000556644 COG5Q9UP83 839 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 MTCH2Q9Y6C9 303 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 RLFQ13129 1914 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 CLSPNQ9HAW4 1339 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 EPOPA6NHQ4 379 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 KBTBD13C9JR72 458 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 DCXO43602 365 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 GTPBP6O43824 516 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-242ENST00000556644 TAF5LO75529 589 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 IL9P15248 144 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 SNX17Q15036 470 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 RAB30Q15771 203 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 KRT24Q2M2I5 525 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 AMER1Q5JTC6 1135 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-242ENST00000556644 PPP2R2DQ66LE6 453 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 C16orf59Q7L2K0 433 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 FAM178BQ8IXR5 827 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 LPAR1Q92633 364 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 TSPYL4Q9UJ04 414 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 SERPINA10Q9UK55 444 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 BRWD1Q9NSI6 2320 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-242ENST00000556644 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
ATXN3-242ENST00000556644 APBB1O00213 710 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 HTATSF1O43719 755 aaKnown RBP5.52□□□□□ -1.53
ATXN3-242ENST00000556644 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-242ENST00000556644 SLURP2P0DP57 97 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 CTSWP56202 376 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TCP10Q12799 353 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 NOL9Q5SY16 702 aaKnown RBP5.52□□□□□ -1.53
ATXN3-242ENST00000556644 ASCL5Q7RTU5 278 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 ZNF804AQ7Z570 1209 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TRPV1Q8NER1 839 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 HOOK2Q96ED9 719 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 MFSD14AQ96MC6 490 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 MYD88Q99836 296 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 PICK1Q9NRD5 415 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TMEM39AQ9NV64 488 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TMOD2Q9NZR1 351 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 FLRT1Q9NZU1 646 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 ZNF112Q9UJU3 913 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 AGTPBP1Q9UPW5 1226 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 SLC45A1Q9Y2W3 748 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 NDUFB9Q9Y6M9 179 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 CACNA1HO95180 2353 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 ACACBO00763 2458 aa5.52□□□□□ -1.53
ATXN3-242ENST00000556644 GBF1Q92538 1859 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 DCHS1Q96JQ0 3298 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 KIAA0355O15063 1070 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 PCCAP05165 728 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 XRCC5P13010 732 aaKnown RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 HOXB3P14651 431 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 IL1R1P14778 569 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 PTPRAP18433 802 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 CYP2C19P33261 490 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 IGHMBP2P38935 993 aaKnown RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 RGS2P41220 211 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 FKBP1AP62942 108 aaKnown RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 CHRNDQ07001 517 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 RASIP1Q5U651 963 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 ZNF365Q70YC5 407 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 SOCS4Q8WXH5 440 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 ATOH1Q92858 354 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-242ENST00000556644 APBA2Q99767 749 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 ANKRD2Q9GZV1 360 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 PNMA3Q9UL41 463 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 AFG3L2Q9Y4W6 797 aa5.51□□□□□ -1.53
ATXN3-242ENST00000556644 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 PTPRFP10586 1907 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 HSP90B1P14625 803 aaKnown RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 CSF2RAP15509 400 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 CD44P16070 742 aaKnown RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 GCLCP48506 637 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 EIF4G2P78344 907 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 CHAF1AQ13111 956 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 TRIM28Q13263 835 aaKnown RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 MFSD14CQ5VZR4 134 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 FAM83AQ86UY5 434 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 TRMT44Q8IYL2 757 aaKnown RBP5.5□□□□□ -1.53
ATXN3-242ENST00000556644 SCYL3Q8IZE3 742 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 ARRDC4Q8NCT1 418 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 TTLL11Q8NHH1 800 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 USP6NLQ92738 828 aa5.5□□□□□ -1.53
ATXN3-242ENST00000556644 FAM163AQ96GL9 167 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms