RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
ACTN1-221ENST00000556571 LDHCP07864 332 aa14.71□□□□□ -0.05
ACTN1-221ENST00000556571 BMP8BP34820 402 aa14.71□□□□□ -0.05
ACTN1-221ENST00000556571 GSTO1P78417 241 aa14.71□□□□□ -0.05
ACTN1-221ENST00000556571 MVPQ14764 893 aaKnown RBP14.71□□□□□ -0.05
ACTN1-221ENST00000556571 DIS3LQ8TF46 1054 aaKnown RBP14.71□□□□□ -0.05
ACTN1-221ENST00000556571 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
ACTN1-221ENST00000556571 HMX1Q9NP08 348 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-221ENST00000556571 GJD2Q9UKL4 321 aa14.71□□□□□ -0.05
ACTN1-221ENST00000556571 A0A0C4DFX4 3053 aa14.71□□□□□ -0.06
ACTN1-221ENST00000556571 MYH2Q9UKX2 1941 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 RPTORQ8N122 1335 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 A0A1B0GUL7 405 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 GPR153Q6NV75 609 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 XAGE2Q96GT9 111 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 GDF15Q99988 308 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 API5Q9BZZ5 524 aaKnown RBP14.7□□□□□ -0.06
ACTN1-221ENST00000556571 NBPF3Q9H094 633 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 DOCK2Q92608 1830 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 DOCK3Q8IZD9 2030 aa14.7□□□□□ -0.06
ACTN1-221ENST00000556571 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 USP17L5A8MUK1 530 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 CAP2P40123 477 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 HMGCS2P54868 508 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 SH3D19Q5HYK7 790 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 C7orf61Q8IZ16 206 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 ZNF384Q8TF68 577 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-221ENST00000556571 AS3MTQ9HBK9 375 aa14.69□□□□□ -0.06
ACTN1-221ENST00000556571 NOB1Q9ULX3 412 aaKnown RBP14.69□□□□□ -0.06
ACTN1-221ENST00000556571 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-221ENST00000556571 TFCP2Q12800 502 aa14.68□□□□□ -0.06
ACTN1-221ENST00000556571 SPATA5Q8NB90 893 aa14.68□□□□□ -0.06
ACTN1-221ENST00000556571 NSUN4Q96CB9 384 aaKnown RBP14.68□□□□□ -0.06
ACTN1-221ENST00000556571 HMG20BQ9P0W2 317 aa14.68□□□□□ -0.06
ACTN1-221ENST00000556571 MORF4L1Q9UBU8 362 aa14.68□□□□□ -0.06
ACTN1-221ENST00000556571 HERC5Q9UII4 1024 aaKnown RBP14.68□□□□□ -0.06
ACTN1-221ENST00000556571 DOCK1Q14185 1865 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 PTPRFP10586 1907 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 GORABQ5T7V8 394 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 NEUROD6Q96NK8 337 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 MEIS3Q99687 375 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 C11orf49Q9H6J7 331 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 RAI14Q9P0K7 980 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 OGDHLQ9ULD0 1010 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 ZMYND8Q9ULU4 1186 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-221ENST00000556571 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-221ENST00000556571 COL6A3P12111 3177 aa14.67□□□□□ -0.06
ACTN1-221ENST00000556571 PHIPQ8WWQ0 1821 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 SRGAP3O43295 1099 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 GNAI3P08754 354 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-221ENST00000556571 IRX3P78415 501 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-221ENST00000556571 TRIM32Q13049 653 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 RRP1BQ14684 758 aaKnown RBP14.66□□□□□ -0.06
ACTN1-221ENST00000556571 TBC1D9Q6ZT07 1266 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 TEX11Q8IYF3 940 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 WDR18Q9BV38 432 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 DHX36Q9H2U1 1008 aaKnown RBP14.66□□□□□ -0.06
ACTN1-221ENST00000556571 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
ACTN1-221ENST00000556571 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
ACTN1-221ENST00000556571 CYP2B6P20813 491 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 HOXA7P31268 230 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-221ENST00000556571 BACE1P56817 501 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 MTX1Q13505 466 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 LRIT3Q3SXY7 679 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 MAP3K21Q5TCX8 1036 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 TRMT44Q8IYL2 757 aaKnown RBP14.65□□□□□ -0.06
ACTN1-221ENST00000556571 TRMT2AQ8IZ69 625 aaKnown RBP14.65□□□□□ -0.06
ACTN1-221ENST00000556571 DEFB123Q8N688 67 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 TRIB2Q92519 343 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 NOL10Q9BSC4 688 aaKnown RBP14.65□□□□□ -0.06
ACTN1-221ENST00000556571 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
ACTN1-221ENST00000556571 C19orf81C9J6K1 198 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 BAG3O95817 575 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 ASNSP08243 561 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 SYN1P17600 705 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 ARID4AP29374 1257 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-221ENST00000556571 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-221ENST00000556571 MTMR2Q13614 643 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 PI16Q6UXB8 463 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 SOCS4Q8WXH5 440 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 P2RX7Q99572 595 aaKnown RBP14.64□□□□□ -0.07
ACTN1-221ENST00000556571 LRP2BPQ9P2M1 347 aa14.64□□□□□ -0.07
ACTN1-221ENST00000556571 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
ACTN1-221ENST00000556571 PLCG2P16885 1265 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 MAPK4P31152 587 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 HERVK_113P62684 666 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-221ENST00000556571 TDHQ8IZJ6 230 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 SH3RF3Q8TEJ3 882 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-221ENST00000556571 ARHGAP45Q92619 1136 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 GINM1Q9NU53 330 aa14.63□□□□□ -0.07
ACTN1-221ENST00000556571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-221ENST00000556571 CCAR1Q8IX12 1150 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms