RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 ADAMTSL1Q8N6G6 1762 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 KLF18A0A0U1RQI7 1052 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 NFIAQ12857 509 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 PICALMQ13492 652 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 AGBL3Q8NEM8 1001 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
LINC01550-206ENST00000556462 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
LINC01550-206ENST00000556462 GJB2P29033 226 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
LINC01550-206ENST00000556462 NUCB2P80303 420 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 SEC23AQ15436 765 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 CIAPIN1Q6FI81 312 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 CTDNEP1O95476 244 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
LINC01550-206ENST00000556462 OSBPL5Q9H0X9 879 aaPredicted RBP12.73□□□□□ -0.37
LINC01550-206ENST00000556462 NCOA5Q9HCD5 579 aaKnown RBP12.73□□□□□ -0.37
LINC01550-206ENST00000556462 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 LAMB1P07942 1786 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 FZD9O00144 591 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 CACNB3P54284 484 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 C16orf86Q6ZW13 317 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 TDRD3Q9H7E2 651 aaKnown RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
LINC01550-206ENST00000556462 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
LINC01550-206ENST00000556462 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 JAK2O60674 1132 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
LINC01550-206ENST00000556462 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 CDK8P49336 464 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 NT5C2P49902 561 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 GABPAQ06546 454 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 WTAPQ15007 396 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 TNIP1Q15025 636 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 IQCA1Q86XH1 822 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
LINC01550-206ENST00000556462 NSUN7Q8NE18 718 aaKnown RBP12.71□□□□□ -0.37
LINC01550-206ENST00000556462 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
LINC01550-206ENST00000556462 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 MKNK2Q9HBH9 465 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 TNKSO95271 1327 aa12.71□□□□□ -0.37
LINC01550-206ENST00000556462 ERICH2A1L162 156 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 BRD1O95696 1058 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 RASA1P20936 1047 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 SYT1P21579 422 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 NFKBIBQ15653 356 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 TTC6Q86TZ1 520 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.38
LINC01550-206ENST00000556462 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 NMT2O60551 498 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 TFAP4Q01664 338 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 IL17RBQ9NRM6 502 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
LINC01550-206ENST00000556462 SLC12A7Q9Y666 1083 aa12.7□□□□□ -0.38
LINC01550-206ENST00000556462 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 ZBTB43O43298 467 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 RXRAP19793 462 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 TCP10Q12799 353 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
LINC01550-206ENST00000556462 ZBED3Q96IU2 234 aaPredicted RBP12.69□□□□□ -0.38
LINC01550-206ENST00000556462 MYL10Q9BUA6 226 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF287Q9HBT7 754 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 MYH1P12882 1939 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
LINC01550-206ENST00000556462 CDC27P30260 824 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
LINC01550-206ENST00000556462 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 TCP11L1Q9NUJ3 509 aa12.69□□□□□ -0.38
LINC01550-206ENST00000556462 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms