RNA–Protein interactions for RNA: ENST00000556428.5

SNW1-206, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-206ENST00000556428 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
SNW1-206ENST00000556428 RPGRQ92834 1020 aaKnown RBP8.36□□□□□ -1.07
SNW1-206ENST00000556428 TRIM5Q9C035 493 aa8.36□□□□□ -1.07
SNW1-206ENST00000556428 NUP62CLQ9H1M0 184 aa8.36□□□□□ -1.07
SNW1-206ENST00000556428 NMRK2Q9NPI5 230 aa8.36□□□□□ -1.07
SNW1-206ENST00000556428 TRMT112Q9UI30 125 aaKnown RBP8.36□□□□□ -1.07
SNW1-206ENST00000556428 DDX60Q8IY21 1712 aaKnown RBP8.36□□□□□ -1.07
SNW1-206ENST00000556428 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 SKILP12757 684 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 CCZ1BP86790 482 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 CCZ1P86791 482 aaPredicted RBP8.35□□□□□ -1.07
SNW1-206ENST00000556428 ICA1Q05084 483 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 ERCC6LQ2NKX8 1250 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 RABGGTAQ92696 567 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 CBX8Q9HC52 389 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 SNED1Q8TER0 1413 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 DICER1Q9UPY3 1922 aaKnown RBP8.35□□□□□ -1.07
SNW1-206ENST00000556428 SH3TC1Q8TE82 1336 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 NEK4P51957 841 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 LRMPQ12912 555 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 TUBB2AQ13885 445 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 DNAJC21Q5F1R6 531 aaKnown RBP8.35□□□□□ -1.07
SNW1-206ENST00000556428 FAM89AQ96GI7 184 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 ISCA1Q9BUE6 129 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 TUBB2BQ9BVA1 445 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 TMX1Q9H3N1 280 aa8.35□□□□□ -1.07
SNW1-206ENST00000556428 CTAGE5O15320 804 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 SRGAP3O43295 1099 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
SNW1-206ENST00000556428 LMAN1P49257 510 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 EXOSC9Q06265 439 aaKnown RBP8.34□□□□□ -1.07
SNW1-206ENST00000556428 NEDD9Q14511 834 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 MAP9Q49MG5 647 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 RPAP2Q8IXW5 612 aaPredicted RBP8.34□□□□□ -1.07
SNW1-206ENST00000556428 MICALL1Q8N3F8 863 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 STK31Q9BXU1 1019 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 TOMM22Q9NS69 142 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 USTQ9Y2C2 406 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 TAF1P21675 1872 aa8.34□□□□□ -1.07
SNW1-206ENST00000556428 A6NNZ2 444 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 POLR3GO15318 223 aaPredicted RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 STX6O43752 255 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 USP5P45974 858 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 ETF1P62495 437 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 CRYMQ14894 314 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 TUBB8Q3ZCM7 444 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 SLC10A5Q5PT55 438 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 FAM71BQ8TC56 605 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 RBM17Q96I25 401 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 MYD88Q99836 296 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 FUT8Q9BYC5 575 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 API5Q9BZZ5 524 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 GNL3LQ9NVN8 582 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 SSUH2Q9Y2M2 353 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 COL4A1P02462 1669 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 HAX1O00165 279 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 DDX58O95786 925 aaKnown RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 SDSP20132 328 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 FKBP4Q02790 459 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNW1-206ENST00000556428 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 G2E3Q7L622 706 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 MPNDQ8N594 471 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 CRAMP1Q96RY5 1269 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 GBP3Q9H0R5 595 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 CLSTN2Q9H4D0 955 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 ZNF277Q9NRM2 450 aaPredicted RBP8.33□□□□□ -1.08
SNW1-206ENST00000556428 MAP3K2Q9Y2U5 619 aa8.33□□□□□ -1.08
SNW1-206ENST00000556428 AOX1Q06278 1338 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 GLTPD2A6NH11 291 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 H0YHG0 523 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 MRPL12P52815 198 aaKnown RBP8.32□□□□□ -1.08
SNW1-206ENST00000556428 SARNPP82979 210 aaKnown RBP8.32□□□□□ -1.08
SNW1-206ENST00000556428 APBB1IPQ7Z5R6 666 aaPredicted RBP8.32□□□□□ -1.08
SNW1-206ENST00000556428 RTKN2Q8IZC4 609 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 MIEF2Q96C03 454 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 SCAND2PQ9GZW5 306 aaPredicted RBP8.32□□□□□ -1.08
SNW1-206ENST00000556428 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
SNW1-206ENST00000556428 GOLGA6L19H0YKK7 550 aa8.31□□□□□ -1.08
SNW1-206ENST00000556428 VAMP4O75379 141 aa8.31□□□□□ -1.08
SNW1-206ENST00000556428 ERLIN1O75477 346 aa8.31□□□□□ -1.08
SNW1-206ENST00000556428 ERLIN2O94905 339 aa8.31□□□□□ -1.08
SNW1-206ENST00000556428 KRT85P78386 507 aa8.31□□□□□ -1.08
SNW1-206ENST00000556428 TRIM28Q13263 835 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms