RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MAGEB6Q8N7X4 407 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 FZD1Q9UP38 647 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 FAM155AB1AL88 458 aaPredicted RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 CHGBP05060 677 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 MX1P20591 662 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 NF2P35240 595 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 PDE1AP54750 535 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 MAP3K10Q02779 954 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 TCP10Q12799 353 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 SLC9C2Q5TAH2 1124 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 SH3RF3Q8TEJ3 882 aaPredicted RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 CAPNS2Q96L46 248 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 RIOK1Q9BRS2 568 aaKnown RBP11.71□□□□□ -0.53
SRP54-210ENST00000556380 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
SRP54-210ENST00000556380 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.53
SRP54-210ENST00000556380 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
SRP54-210ENST00000556380 ATRNL1Q5VV63 1379 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 PAPPA2Q9BXP8 1791 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
SRP54-210ENST00000556380 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
SRP54-210ENST00000556380 BAG3O95817 575 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 ADD2P35612 726 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 PRKG1Q13976 671 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
SRP54-210ENST00000556380 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
SRP54-210ENST00000556380 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
SRP54-210ENST00000556380 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
SRP54-210ENST00000556380 ERC2O15083 957 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 AOC2O75106 756 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 FOXK1P85037 733 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
SRP54-210ENST00000556380 UBE3CQ15386 1083 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 ZIC5Q96T25 663 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 ZNF112Q9UJU3 913 aa11.69□□□□□ -0.54
SRP54-210ENST00000556380 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 SLC10A3P09131 477 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 MAP2K2P36507 400 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 ECE1P42892 770 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
SRP54-210ENST00000556380 PICALMQ13492 652 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.68□□□□□ -0.54
SRP54-210ENST00000556380 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 CERS3Q8IU89 383 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 PLPP6Q8IY26 295 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRP54-210ENST00000556380 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
SRP54-210ENST00000556380 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
SRP54-210ENST00000556380 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
SRP54-210ENST00000556380 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
SRP54-210ENST00000556380 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 PHF20L1A8MW92 1017 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 PDE4AP27815 886 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 IREB2P48200 963 aaKnown RBP11.67□□□□□ -0.54
SRP54-210ENST00000556380 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
SRP54-210ENST00000556380 TGFBRAP1Q8WUH2 860 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 CSRNP1Q96S65 589 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■□□□ 13.6
SRP54-210ENST00000556380 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
SRP54-210ENST00000556380 MAST2Q6P0Q8 1798 aa11.67□□□□□ -0.54
SRP54-210ENST00000556380 FLT1P17948 1338 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
SRP54-210ENST00000556380 TBC1D12O60347 775 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 NOGQ13253 232 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 DSG2Q14126 1118 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
SRP54-210ENST00000556380 MAPKAPK5Q8IW41 473 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 ZNF341Q9BYN7 854 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 PUS7LQ9H0K6 701 aaKnown RBP11.66□□□□□ -0.54
SRP54-210ENST00000556380 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
SRP54-210ENST00000556380 GJA5P36382 358 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 KIF23Q02241 960 aaPredicted RBP11.65□□□□□ -0.54
SRP54-210ENST00000556380 GRM1Q13255 1194 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 VGLL4Q14135 290 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 SPRYD7Q5W111 196 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
SRP54-210ENST00000556380 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms