RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 STRCQ7RTU9 1775 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 REREQ9P2R6 1566 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 ZNF423Q2M1K9 1284 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 GALNT12Q8IXK2 581 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 NRSN2Q9GZP1 204 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 LGR6Q9HBX8 967 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 FAM105AQ9NUU6 356 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 NPATQ14207 1427 aa5.96□□□□□ -1.46
ATXN3-240ENST00000556339 ZNF335Q9H4Z2 1342 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-240ENST00000556339 TNRQ92752 1358 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 CLTCQ00610 1675 aaKnown RBP5.95□□□□□ -1.46
ATXN3-240ENST00000556339 RTEL1-TNFRSF6BF6WH68 1400 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 H3BRB1 525 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 NDUFB5O43674 189 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 TOM1O60784 492 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 CTSBP07858 339 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 HNRNPUQ00839 825 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-240ENST00000556339 FZD5Q13467 585 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 B4GALNT3Q6L9W6 998 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 OGFOD2Q6N063 350 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 TUT1Q9H6E5 874 aaKnown RBP5.95□□□□□ -1.46
ATXN3-240ENST00000556339 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 RRP7BPQ9NSQ0 103 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 ZC3H7BQ9UGR2 993 aaKnown RBP5.95□□□□□ -1.46
ATXN3-240ENST00000556339 SLC5A6Q9Y289 635 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 CAMSAP1Q5T5Y3 1602 aa5.95□□□□□ -1.46
ATXN3-240ENST00000556339 EHBP1L1Q8N3D4 1523 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 ARID1BQ8NFD5 2236 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-240ENST00000556339 PTPRKQ15262 1439 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 NCOA1Q15788 1441 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 CARNS1A5YM72 827 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 JUNBP17275 347 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-240ENST00000556339 PLCL1Q15111 1095 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 CYP27C1Q4G0S4 372 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 TMC1Q8TDI8 760 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 TCF12Q99081 682 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 ACSS3Q9H6R3 686 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 NCOA2Q15596 1464 aa5.94□□□□□ -1.46
ATXN3-240ENST00000556339 AOC2O75106 756 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 CPNE3O75131 537 aaKnown RBP5.93□□□□□ -1.46
ATXN3-240ENST00000556339 GADD45BO75293 160 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-240ENST00000556339 ECEL1O95672 775 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 B3GALT4O96024 378 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 AP3B2Q13367 1082 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 PDE3BQ13370 1112 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
ATXN3-240ENST00000556339 USPL1Q5W0Q7 1092 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 ARHGAP27Q6ZUM4 889 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 STK11IPQ8N1F8 1099 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 GATA6Q92908 595 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 NPHS2Q9NP85 383 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 PAK6Q9NQU5 681 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-240ENST00000556339 CCDC141Q6ZP82 1450 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 MBD5Q9P267 1494 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 ADGBQ8N7X0 1667 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 TIAM1Q13009 1591 aa5.93□□□□□ -1.46
ATXN3-240ENST00000556339 MROH2AA6NES4 1674 aa5.92□□□□□ -1.46
ATXN3-240ENST00000556339 CAMSAP2Q08AD1 1489 aa5.92□□□□□ -1.46
ATXN3-240ENST00000556339 CBLL1Q75N03 491 aa5.92□□□□□ -1.46
ATXN3-240ENST00000556339 TRIM56Q9BRZ2 755 aaKnown RBP5.92□□□□□ -1.46
ATXN3-240ENST00000556339 ZC3H12CQ9C0D7 883 aaKnown RBP5.92□□□□□ -1.46
ATXN3-240ENST00000556339 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
ATXN3-240ENST00000556339 EID1Q9Y6B2 187 aa5.92□□□□□ -1.46
ATXN3-240ENST00000556339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-240ENST00000556339 VPS8Q8N3P4 1428 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 MIA2Q96PC5 1412 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 BIN1O00499 593 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 ICMTO60725 284 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 SLFN14P0C7P3 912 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 ZNF157P51786 506 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-240ENST00000556339 ORC1Q13415 861 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 KIAA0319Q5VV43 1072 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 OGFOD3Q6PK18 319 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 NFXL1Q6ZNB6 911 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 TXNDC2Q86VQ3 553 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 WDR18Q9BV38 432 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 INO80Q9ULG1 1556 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-240ENST00000556339 KANK1Q14678 1352 aa5.91□□□□□ -1.46
ATXN3-240ENST00000556339 A2ML1A8K2U0 1454 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 LRRC9Q6ZRR7 1453 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 DYNC1LI2O43237 492 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-240ENST00000556339 RNGTTO60942 597 aaKnown RBP5.9□□□□□ -1.46
ATXN3-240ENST00000556339 LIG1P18858 919 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 ITPKAP23677 461 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 ZNF574Q6ZN55 896 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-240ENST00000556339 BCL7CQ8WUZ0 217 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-240ENST00000556339 ATXN3LQ9H3M9 355 aa5.9□□□□□ -1.46
ATXN3-240ENST00000556339 MYOM3Q5VTT5 1437 aa5.9□□□□□ -1.47
ATXN3-240ENST00000556339 FAM135AQ9P2D6 1515 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 CEP170BQ9Y4F5 1589 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-240ENST00000556339 FAM87AP0C7U9 286 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 ITGB5P18084 799 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 HSPA1LP34931 641 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-240ENST00000556339 SERPINB4P48594 390 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 MISP3Q96FF7 219 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms