RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
ATXN3-236ENST00000556220 CNGB1Q14028 1251 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-236ENST00000556220 SF3B3Q15393 1217 aaKnown RBP9.02□□□□□ -0.97
ATXN3-236ENST00000556220 CFAP53Q96M91 514 aa9.02□□□□□ -0.97
ATXN3-236ENST00000556220 DUOX1Q9NRD9 1551 aa9.02□□□□□ -0.97
ATXN3-236ENST00000556220 COL6A3P12111 3177 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 ESPNB1AK53 854 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 H0YGN5 161 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
ATXN3-236ENST00000556220 RPS8P62241 208 aaKnown RBP9.01□□□□□ -0.97
ATXN3-236ENST00000556220 RELBQ01201 579 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 LDLRAD1Q5T700 205 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 ARMC9Q7Z3E5 817 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 TMPRSS4Q9NRS4 437 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 PODXL2Q9NZ53 605 aa9.01□□□□□ -0.97
ATXN3-236ENST00000556220 PAPPA2Q9BXP8 1791 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 MANSC4A6NHS7 340 aaPredicted RBP9□□□□□ -0.97
ATXN3-236ENST00000556220 ERVH48-1M5A8F1 160 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 ANXA1P04083 346 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 PROSER3Q2NL68 480 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 COPS6Q7L5N1 327 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 IL27Q8NEV9 243 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 CD99L2Q8TCZ2 262 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
ATXN3-236ENST00000556220 LAMA3Q16787 3333 aa9□□□□□ -0.97
ATXN3-236ENST00000556220 ZNF609O15014 1411 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 LILRA1O75019 489 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 UFL1O94874 794 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-236ENST00000556220 AIMP1Q12904 312 aaKnown RBP8.99□□□□□ -0.97
ATXN3-236ENST00000556220 PRKG1Q13976 671 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 FAM89AQ96GI7 184 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 INSM2Q96T92 566 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-236ENST00000556220 GGA1Q9UJY5 639 aa8.99□□□□□ -0.97
ATXN3-236ENST00000556220 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 ZBBXA8MT70 800 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-236ENST00000556220 WNT10BO00744 389 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 ADH1AP07327 375 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 RAB15P59190 212 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 NBPF11Q86T75 865 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 POLMQ9NP87 494 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-236ENST00000556220 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
ATXN3-236ENST00000556220 ANGEL1Q9UNK9 670 aaKnown RBP8.98□□□□□ -0.97
ATXN3-236ENST00000556220 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-236ENST00000556220 CAP1Q01518 475 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 SP3Q02447 781 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 ZNF428Q96B54 188 aa8.97□□□□□ -0.97
ATXN3-236ENST00000556220 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-236ENST00000556220 UNCXA6NJT0 531 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 NEFMP07197 916 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 ADD1P35611 737 aaKnown RBP8.96□□□□□ -0.98
ATXN3-236ENST00000556220 PTGIRP43119 386 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 MMP14P50281 582 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 CRHR2Q13324 411 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 MAP3K11Q16584 847 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
ATXN3-236ENST00000556220 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 ISCA1Q9BUE6 129 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 TSPYL4Q9UJ04 414 aa8.96□□□□□ -0.98
ATXN3-236ENST00000556220 ANKRD36CQ5JPF3 1778 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 IRS4O14654 1257 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-236ENST00000556220 ARHGEF6Q15052 776 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 SLC9C1Q4G0N8 1177 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 APOBEC3FQ8IUX4 373 aaKnown RBP8.95□□□□□ -0.98
ATXN3-236ENST00000556220 DPF3Q92784 378 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 WNK4Q96J92 1243 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 MXD3Q9BW11 206 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 PRO3102Q9H379 93 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 FZD1Q9UP38 647 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 SCN9AQ15858 1988 aa8.95□□□□□ -0.98
ATXN3-236ENST00000556220 TAF1P21675 1872 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 WTIPA6NIX2 430 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-236ENST00000556220 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PPP1R12BO60237 982 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-236ENST00000556220 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 ITGA6P23229 1130 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 ATP2B4P23634 1241 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
ATXN3-236ENST00000556220 MCCD1P59942 119 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-236ENST00000556220 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms