RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 FOXP4Q8IVH2 680 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-210ENST00000556166 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-210ENST00000556166 RBM8AQ9Y5S9 174 aaKnown RBP13.68□□□□□ -0.22
GABRB3-210ENST00000556166 CDK5RAP2Q96SN8 1893 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 JAG1P78504 1218 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 PPARAQ07869 468 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 EHD4Q9H223 541 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-210ENST00000556166 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
GABRB3-210ENST00000556166 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 SHMT1P34896 483 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 SHROOM1Q2M3G4 852 aaPredicted RBP13.66□□□□□ -0.22
GABRB3-210ENST00000556166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.66□□□□□ -0.22
GABRB3-210ENST00000556166 ZNF112Q9UJU3 913 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 FOCADQ5VW36 1801 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 UBE2Q2LH0YL09 131 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 CYP21A2P08686 494 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 CDK8P49336 464 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
GABRB3-210ENST00000556166 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
GABRB3-210ENST00000556166 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
GABRB3-210ENST00000556166 REC8O95072 547 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 FGRP09769 529 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 INPP5BP32019 993 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 LDLRAD1Q5T700 205 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
GABRB3-210ENST00000556166 GBA2Q9HCG7 927 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-210ENST00000556166 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
GABRB3-210ENST00000556166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
GABRB3-210ENST00000556166 ZNF213O14771 459 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 SLC27A2O14975 620 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 PRDM1O75626 825 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 NF2P35240 595 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 CRACR2BQ8N4Y2 399 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 KCNB2Q92953 911 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
GABRB3-210ENST00000556166 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
GABRB3-210ENST00000556166 PPP1R12BO60237 982 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-210ENST00000556166 RASA1P20936 1047 aa13.63□□□□□ -0.23
GABRB3-210ENST00000556166 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-210ENST00000556166 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
GABRB3-210ENST00000556166 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
GABRB3-210ENST00000556166 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
GABRB3-210ENST00000556166 CLMNQ96JQ2 1002 aa13.63□□□□□ -0.23
GABRB3-210ENST00000556166 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
GABRB3-210ENST00000556166 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-210ENST00000556166 HSPA4P34932 840 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 MAP3K9P80192 1104 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 STAG1Q8WVM7 1258 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.62□□□□□ -0.23
GABRB3-210ENST00000556166 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 SWAP70Q9UH65 585 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 MYH1P12882 1939 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 NEDD4P46934 1319 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 GDF11O95390 407 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 AKR1B1P15121 316 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 CAP2P40123 477 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
GABRB3-210ENST00000556166 FKBP1BP68106 108 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 VGLL4Q14135 290 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 CERKLQ49MI3 558 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-210ENST00000556166 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
GABRB3-210ENST00000556166 E7EWF7 191 aa13.61□□□□□ -0.23
GABRB3-210ENST00000556166 EPB41L2O43491 1005 aaKnown RBP13.61□□□□□ -0.23
GABRB3-210ENST00000556166 ORC4O43929 436 aa13.61□□□□□ -0.23
GABRB3-210ENST00000556166 CTNND1O60716 968 aaKnown RBP13.61□□□□□ -0.23
GABRB3-210ENST00000556166 APLP1P51693 650 aa13.61□□□□□ -0.23
GABRB3-210ENST00000556166 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
GABRB3-210ENST00000556166 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms