RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 DAGLAQ9Y4D2 1042 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 ZHX2Q9Y6X8 837 aa13.43□□□□□ -0.26
CHGA-205ENST00000556098 TTC41PQ6P2S7 1318 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 CDC45O75419 566 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
CHGA-205ENST00000556098 SYN1P17600 705 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 PICALMQ13492 652 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
CHGA-205ENST00000556098 FKBP1CQ5VVH2 108 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 HHIPL2Q6UWX4 724 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
CHGA-205ENST00000556098 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 COPRSQ9NQ92 184 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.42□□□□□ -0.26
CHGA-205ENST00000556098 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
CHGA-205ENST00000556098 LDHBP07195 334 aaKnown RBP13.41□□□□□ -0.26
CHGA-205ENST00000556098 BCRP11274 1271 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 MX1P20591 662 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 PRDX5P30044 214 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 MOGSQ13724 837 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 Q7L0L9 218 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
CHGA-205ENST00000556098 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
CHGA-205ENST00000556098 ANKRD13CQ8N6S4 541 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 WDR66Q8TBY9 1149 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 SIL1Q9H173 461 aa13.41□□□□□ -0.26
CHGA-205ENST00000556098 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 PDE1AP54750 535 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHGA-205ENST00000556098 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
CHGA-205ENST00000556098 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
CHGA-205ENST00000556098 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
CHGA-205ENST00000556098 NECAB2Q7Z6G3 386 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 VGLL2Q8N8G2 317 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 COA7Q96BR5 231 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 IPO9Q96P70 1041 aaKnown RBP13.4□□□□□ -0.26
CHGA-205ENST00000556098 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
CHGA-205ENST00000556098 CXCL11O14625 94 aa13.39□□□□□ -0.27
CHGA-205ENST00000556098 ERC2O15083 957 aa13.39□□□□□ -0.27
CHGA-205ENST00000556098 EPB41L2O43491 1005 aaKnown RBP13.39□□□□□ -0.27
CHGA-205ENST00000556098 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
CHGA-205ENST00000556098 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHGA-205ENST00000556098 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
CHGA-205ENST00000556098 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
CHGA-205ENST00000556098 MYO5AQ9Y4I1 1855 aaKnown RBP13.39□□□□□ -0.27
CHGA-205ENST00000556098 A0A0G2JLL6 359 aaPredicted RBP13.38□□□□□ -0.27
CHGA-205ENST00000556098 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
CHGA-205ENST00000556098 PTPRAP18433 802 aa13.38□□□□□ -0.27
CHGA-205ENST00000556098 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
CHGA-205ENST00000556098 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
CHGA-205ENST00000556098 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
CHGA-205ENST00000556098 MRIQ9BWK5 157 aa13.38□□□□□ -0.27
CHGA-205ENST00000556098 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
CHGA-205ENST00000556098 LPIN2Q92539 896 aa13.37□□□□□ -0.27
CHGA-205ENST00000556098 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
CHGA-205ENST00000556098 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
CHGA-205ENST00000556098 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
CHGA-205ENST00000556098 EYA2O00167 538 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 GLRX3O76003 335 aaKnown RBP13.36□□□□□ -0.27
CHGA-205ENST00000556098 CIAO1O76071 339 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
CHGA-205ENST00000556098 FGFR2P21802 821 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 ATP2B3Q16720 1220 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 PXYLP1Q8TE99 480 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 AFG3L2Q9Y4W6 797 aa13.36□□□□□ -0.27
CHGA-205ENST00000556098 MYH1P12882 1939 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 COL6A3P12111 3177 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 FOCADQ5VW36 1801 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
CHGA-205ENST00000556098 REC8O95072 547 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 TRIM32Q13049 653 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 IRF5Q13568 498 aa13.35□□□□□ -0.27
CHGA-205ENST00000556098 UBE2OQ9C0C9 1292 aaKnown RBP13.35□□□□□ -0.27
CHGA-205ENST00000556098 PAK6Q9NQU5 681 aaPredicted RBP13.35□□□□□ -0.27
CHGA-205ENST00000556098 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 APBB1O00213 710 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 CYP2B6P20813 491 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 BTDP43251 543 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 PHKA1P46020 1223 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 BECN1Q14457 450 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms