RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MKRN1Q9UHC7 482 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 SERPINB13Q9UIV8 391 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 SCAF8Q9UPN6 1271 aaKnown RBP9.1□□□□□ -0.95
TDP1-214ENST00000556063 NAV1Q8NEY1 1877 aa9.1□□□□□ -0.95
TDP1-214ENST00000556063 PASKQ96RG2 1323 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 UTRNP46939 3433 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 DDTLA6NHG4 134 aaPredicted RBP9.09□□□□□ -0.95
TDP1-214ENST00000556063 MINDY4BA8MYZ0 360 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 FGAP02671 866 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 IMMTQ16891 758 aaKnown RBP9.09□□□□□ -0.95
TDP1-214ENST00000556063 C12orf60Q5U649 245 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
TDP1-214ENST00000556063 ANO2Q9NQ90 1003 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 SWAP70Q9UH65 585 aa9.09□□□□□ -0.95
TDP1-214ENST00000556063 UNCXA6NJT0 531 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 ZNF213O14771 459 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 EPB41L2O43491 1005 aaKnown RBP9.08□□□□□ -0.96
TDP1-214ENST00000556063 PCP11498 1178 aaKnown RBP9.08□□□□□ -0.96
TDP1-214ENST00000556063 NT5C2P49902 561 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 PDE4BQ07343 736 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 PPARAQ07869 468 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 VPS53Q5VIR6 699 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 CTR9Q6PD62 1173 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 MIGA2Q7L4E1 593 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 SH3BP5LQ7L8J4 393 aa9.08□□□□□ -0.96
TDP1-214ENST00000556063 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
TDP1-214ENST00000556063 EPB41L4AQ9HCS5 686 aaPredicted RBP9.08□□□□□ -0.96
TDP1-214ENST00000556063 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
TDP1-214ENST00000556063 MCCP23508 829 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 PLCD1P51178 756 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 APLP1P51693 650 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 MAP3K9P80192 1104 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 PRKG1Q13976 671 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 SLC4A8Q2Y0W8 1093 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
TDP1-214ENST00000556063 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 MAP4K1Q92918 833 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 CCDC17Q96LX7 622 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 WRNIP1Q96S55 665 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 MKNK2Q9HBH9 465 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 CABP5Q9NP86 173 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 GINM1Q9NU53 330 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 ANAPC4Q9UJX5 808 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 ABT1Q9ULW3 272 aaKnown RBP9.07□□□□□ -0.96
TDP1-214ENST00000556063 CSADQ9Y600 493 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 PAPPA2Q9BXP8 1791 aa9.07□□□□□ -0.96
TDP1-214ENST00000556063 CYP2D7A0A087X1C5 515 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 FOXP2O15409 715 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 CTNND1O60716 968 aaKnown RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 USP2O75604 605 aaPredicted RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 CYP2D6P10635 497 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 ZKSCAN1P17029 563 aaPredicted RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 CDK8P49336 464 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 C1QTNF8P60827 252 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 PTH1RQ03431 593 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 GABPAQ06546 454 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 FMR1Q06787 632 aaKnown RBP eCLIP9.06□□□□□ -0.96
TDP1-214ENST00000556063 TRDNQ13061 729 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 CST9Q5W186 159 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 DLK2Q6UY11 383 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 C16orf86Q6ZW13 317 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 CDAN1Q8IWY9 1227 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 ZNF444Q8N0Y2 327 aaPredicted RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 KLRG1Q96E93 195 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 LSG1Q9H089 658 aaKnown RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 IL25Q9H293 177 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 PICK1Q9NRD5 415 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 TOMM22Q9NS69 142 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 ZNF112Q9UJU3 913 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
TDP1-214ENST00000556063 ROBO3Q96MS0 1386 aa9.06□□□□□ -0.96
TDP1-214ENST00000556063 MYH8P13535 1937 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 UBE2Q2LH0YL09 131 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 ASNSP08243 561 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 CAP2P40123 477 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 HUNKP57058 714 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 HAND2P61296 217 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 CERKLQ49MI3 558 aaPredicted RBP9.05□□□□□ -0.96
TDP1-214ENST00000556063 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 AKNAD1Q5T1N1 836 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 LDLRAD1Q5T700 205 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 TATDN1Q6P1N9 297 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.05□□□□□ -0.96
TDP1-214ENST00000556063 SLC10A4Q96EP9 437 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 HHIPL1Q96JK4 782 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 UPF2Q9HAU5 1272 aaKnown RBP9.05□□□□□ -0.96
TDP1-214ENST00000556063 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
TDP1-214ENST00000556063 DDX60LQ5H9U9 1706 aaKnown RBP9.05□□□□□ -0.96
TDP1-214ENST00000556063 LAMB1P07942 1786 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 SSC5DA1L4H1 1573 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 FAM196BA6NMK8 535 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms