RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 PDCP20941 246 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 RANBP1P43487 201 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 CRYMQ14894 314 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 FXNQ16595 210 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 TRIM7Q9C029 511 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 XPO4Q9C0E2 1151 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 TTC41PQ6P2S7 1318 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 GNAI2P04899 355 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 NEDD9Q14511 834 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 TMEM94Q12767 1356 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 JCADQ9P266 1359 aa11.74□□□□□ -0.53
EFCAB11-208ENST00000555872 GCKP35557 465 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 LRRC27Q9C0I9 530 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 ANO10Q9NW15 660 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 IFNKQ9P0W0 207 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 FAN1Q9Y2M0 1017 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MST1RQ04912 1400 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 RPS6KA5O75582 802 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 KCNA2P16389 499 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 PPP2R3AQ06190 1150 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MPP3Q13368 585 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 PLEKHO1Q53GL0 409 aaPredicted RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 CEP57L1Q8IYX8 460 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MCM8Q9UJA3 840 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 MAP2K7O14733 419 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 SRGAP3O43295 1099 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 ZRSR1Q15695 479 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 TADA2BQ86TJ2 420 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 TSGA10Q9BZW7 698 aa11.73□□□□□ -0.53
EFCAB11-208ENST00000555872 BOLA2-SMG1P6H3BVE0 249 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 PHACTR2O75167 634 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 KRT38O76015 456 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 KCNJ6P48051 423 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 PARP9Q8IXQ6 854 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 MMADHCQ9H3L0 296 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 ANKRD62A6NC57 917 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 MMEP08473 750 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 TGFB3P10600 412 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 PDE6BP35913 854 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 ZSWIM6Q9HCJ5 1215 aa11.72□□□□□ -0.53
EFCAB11-208ENST00000555872 PEAK1Q9H792 1746 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 CCDC151A5D8V7 595 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 TPPPO94811 219 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 HNRNPH1P31943 449 aaKnown RBP11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 PTH1RQ03431 593 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 KCNA1Q09470 495 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 RSRC2Q7L4I2 434 aaKnown RBP11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 CCAR1Q8IX12 1150 aaKnown RBP11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 RABGGTAQ92696 567 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 TCEANC2Q96MN5 208 aa11.71□□□□□ -0.53
EFCAB11-208ENST00000555872 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 COL16A1Q07092 1604 aaPredicted RBP11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 CFAP69A5D8W1 941 aa11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 RGPD1P0DJD0 1748 aa11.71□□□□□ -0.54
EFCAB11-208ENST00000555872 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 GNG11P61952 73 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 STK3Q13188 491 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 COL9A3Q14050 684 aaPredicted RBP11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 G2E3Q7L622 706 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 WDR24Q96S15 920 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 KLHL42Q9P2K6 505 aa11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 FBXO9Q9UK97 447 aaPredicted RBP11.7□□□□□ -0.54
EFCAB11-208ENST00000555872 ADCY9O60503 1353 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms