RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
LINC00641-202ENST00000555688 QTRT2Q9H974 415 aaKnown RBP9.32□□□□□ -0.92
LINC00641-202ENST00000555688 HELLSQ9NRZ9 838 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
LINC00641-202ENST00000555688 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 ABCC12Q96J65 1359 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 RPAP1Q9BWH6 1393 aaPredicted RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 COL4A1P02462 1669 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 RNF113AO15541 343 aaKnown RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 CASTP20810 708 aaKnown RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 ZAP70P43403 619 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 PKP1Q13835 747 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 MPNDQ8N594 471 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 JAKMIP1Q96N16 626 aaKnown RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 KCTD15Q96SI1 283 aaPredicted RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
LINC00641-202ENST00000555688 SCN7AQ01118 1682 aa9.31□□□□□ -0.92
LINC00641-202ENST00000555688 HSP90B1P14625 803 aaKnown RBP9.3□□□□□ -0.92
LINC00641-202ENST00000555688 ZKSCAN1P17029 563 aaPredicted RBP9.3□□□□□ -0.92
LINC00641-202ENST00000555688 MCAMP43121 646 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 NUCB2P80303 420 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC00641-202ENST00000555688 SF3B3Q15393 1217 aaKnown RBP9.3□□□□□ -0.92
LINC00641-202ENST00000555688 EML3Q32P44 896 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 GORABQ5T7V8 394 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 VPS53Q5VIR6 699 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 PI16Q6UXB8 463 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 NOL8Q76FK4 1167 aaKnown RBP9.3□□□□□ -0.92
LINC00641-202ENST00000555688 CDK15Q96Q40 435 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 LRRC4BQ9NT99 713 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
LINC00641-202ENST00000555688 SNAP23O00161 211 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 DEKP35659 375 aaKnown RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 KCNJ4P48050 445 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 ELOAQ14241 798 aaKnown RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 PUM3Q15397 648 aaKnown RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 CCDC102BQ68D86 513 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 LPIN2Q92539 896 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 OSBP2Q969R2 916 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 PDRG1Q9NUG6 133 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 HMG20BQ9P0W2 317 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 LIMCH1Q9UPQ0 1083 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 MAST3O60307 1309 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 CYP21A2P08686 494 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 PHKA1P46020 1223 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 MPHOSPH8Q99549 860 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 DSCC1Q9BVC3 393 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
LINC00641-202ENST00000555688 CYP46A1Q9Y6A2 500 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 ARAP2Q8WZ64 1704 aa9.29□□□□□ -0.92
LINC00641-202ENST00000555688 CASZ1Q86V15 1759 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 M0R2C6 588 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 WNT7AO00755 349 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 FOXP2O15409 715 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 SIAH2O43255 324 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 LARGE1O95461 756 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 HSPD1P10809 573 aaKnown RBP9.28□□□□□ -0.92
LINC00641-202ENST00000555688 TAF1P21675 1872 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 PSMA5P28066 241 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 COL24A1Q17RW2 1714 aa9.28□□□□□ -0.92
LINC00641-202ENST00000555688 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
LINC00641-202ENST00000555688 BRWD3Q6RI45 1802 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 BAG4O95429 457 aaKnown RBP9.27□□□□□ -0.92
LINC00641-202ENST00000555688 ZFYP08048 801 aaPredicted RBP9.27□□□□□ -0.92
LINC00641-202ENST00000555688 RPS6KB1P23443 525 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.92
LINC00641-202ENST00000555688 CHRNDQ07001 517 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 ST3GAL1Q11201 340 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 SPRYD7Q5W111 196 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 SETDB2Q96T68 719 aa9.27□□□□□ -0.92
LINC00641-202ENST00000555688 PIH1D3Q9NQM4 214 aaKnown RBP9.27□□□□□ -0.92
LINC00641-202ENST00000555688 MYH7P12883 1935 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 A0A0G2JLW4 131 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 BRD1O95696 1058 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 UQCRFS1P1P0C7P4 283 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 SLC5A1P13866 664 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 ME3Q16798 604 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 BLOC1S2Q6QNY1 142 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 STOX1Q6ZVD7 989 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 TRIM50Q86XT4 487 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 APPBP2Q92624 585 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
LINC00641-202ENST00000555688 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.93
LINC00641-202ENST00000555688 PUS7LQ9H0K6 701 aaKnown RBP9.27□□□□□ -0.93
LINC00641-202ENST00000555688 BSDC1Q9NW68 430 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms