RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 APBB1O00213 710 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 CYP2C8P10632 490 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 PPP4CP60510 307 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 MAP3K12Q12852 859 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 GPAT2Q6NUI2 795 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 CERS3Q8IU89 383 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
SNX6-205ENST00000555648 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 IL1RAPL2Q9NP60 686 aa18.81■□□□□ 0.6
SNX6-205ENST00000555648 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
SNX6-205ENST00000555648 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 FCGRTP55899 365 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 CAP1Q01518 475 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 MOGSQ13724 837 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 RAET1EQ8TD07 263 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 KIF1BPQ96EK5 621 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
SNX6-205ENST00000555648 COL2A1P02458 1487 aaPredicted RBP18.79■□□□□ 0.6
SNX6-205ENST00000555648 POTEFA5A3E0 1075 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 IFIT2P09913 472 aaKnown RBP18.79■□□□□ 0.6
SNX6-205ENST00000555648 CAP2P40123 477 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 USP5P45974 858 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 SPP2Q13103 211 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 CCDC84Q86UT8 332 aaPredicted RBP18.79■□□□□ 0.6
SNX6-205ENST00000555648 FOXP4Q8IVH2 680 aaPredicted RBP18.79■□□□□ 0.6
SNX6-205ENST00000555648 MAGEB6Q8N7X4 407 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 ZNF280CQ8ND82 737 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 ZNF333Q96JL9 665 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
SNX6-205ENST00000555648 FLT1P17948 1338 aa18.78■□□□□ 0.6
SNX6-205ENST00000555648 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
SNX6-205ENST00000555648 MYCP01106 439 aaPredicted RBP18.78■□□□□ 0.6
SNX6-205ENST00000555648 PABPC4Q13310 644 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNX6-205ENST00000555648 TTF1Q15361 905 aaPredicted RBP18.78■□□□□ 0.6
SNX6-205ENST00000555648 ADGRA1Q86SQ6 560 aa18.78■□□□□ 0.6
SNX6-205ENST00000555648 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.78■□□□□ 0.6
SNX6-205ENST00000555648 SRRDQ9UH36 339 aa18.78■□□□□ 0.6
SNX6-205ENST00000555648 AGTPBP1Q9UPW5 1226 aa18.78■□□□□ 0.6
SNX6-205ENST00000555648 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
SNX6-205ENST00000555648 MIGA1Q8NAN2 632 aa18.77■□□□□ 0.6
SNX6-205ENST00000555648 SH3TC2Q8TF17 1288 aa18.77■□□□□ 0.6
SNX6-205ENST00000555648 TRIM47Q96LD4 638 aa18.77■□□□□ 0.6
SNX6-205ENST00000555648 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
SNX6-205ENST00000555648 BIN2Q9UBW5 565 aaPredicted RBP18.77■□□□□ 0.6
SNX6-205ENST00000555648 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.6
SNX6-205ENST00000555648 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
SNX6-205ENST00000555648 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 ADGRA2Q96PE1 1338 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 ASNSP08243 561 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 OSBPP22059 807 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
SNX6-205ENST00000555648 PRPF38BQ5VTL8 546 aaKnown RBP18.76■□□□□ 0.59
SNX6-205ENST00000555648 PROCA1Q8NCQ7 364 aaPredicted RBP18.76■□□□□ 0.59
SNX6-205ENST00000555648 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
SNX6-205ENST00000555648 DOCK2Q92608 1830 aa18.75■□□□□ 0.59
SNX6-205ENST00000555648 BCRP11274 1271 aa18.75■□□□□ 0.59
SNX6-205ENST00000555648 EN2P19622 333 aaPredicted RBP18.75■□□□□ 0.59
SNX6-205ENST00000555648 HMGCS2P54868 508 aa18.75■□□□□ 0.59
SNX6-205ENST00000555648 ANTXR1Q9H6X2 564 aa18.75■□□□□ 0.59
SNX6-205ENST00000555648 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
SNX6-205ENST00000555648 DNAJC2Q99543 621 aaKnown RBP18.74■□□□□ 0.59
SNX6-205ENST00000555648 GINM1Q9NU53 330 aa18.74■□□□□ 0.59
SNX6-205ENST00000555648 TNPO2O14787 897 aaKnown RBP18.73■□□□□ 0.59
SNX6-205ENST00000555648 GRK4P32298 578 aa18.73■□□□□ 0.59
SNX6-205ENST00000555648 TREML2Q5T2D2 321 aa18.73■□□□□ 0.59
SNX6-205ENST00000555648 TTC6Q86TZ1 520 aa18.73■□□□□ 0.59
SNX6-205ENST00000555648 ANKRD13CQ8N6S4 541 aa18.73■□□□□ 0.59
SNX6-205ENST00000555648 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 GDF11O95390 407 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 CTGFP29279 349 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 GCLCP48506 637 aaPredicted RBP18.72■□□□□ 0.59
SNX6-205ENST00000555648 UBXN2AP68543 259 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
SNX6-205ENST00000555648 PRKCZQ05513 592 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 SLC9C2Q5TAH2 1124 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNX6-205ENST00000555648 COA7Q96BR5 231 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
SNX6-205ENST00000555648 GOLIM4O00461 696 aa18.71■□□□□ 0.59
SNX6-205ENST00000555648 MTMR2Q13614 643 aa18.71■□□□□ 0.59
SNX6-205ENST00000555648 RRP1BQ14684 758 aaKnown RBP18.71■□□□□ 0.59
SNX6-205ENST00000555648 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
SNX6-205ENST00000555648 C19orf81C9J6K1 198 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 POLR3DP05423 398 aaPredicted RBP18.7■□□□□ 0.58
SNX6-205ENST00000555648 BACE1P56817 501 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 SH3D19Q5HYK7 790 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
SNX6-205ENST00000555648 SIRT2Q8IXJ6 389 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
SNX6-205ENST00000555648 SERPINB13Q9UIV8 391 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 ZBTB21Q9ULJ3 1066 aa18.7■□□□□ 0.58
SNX6-205ENST00000555648 USP17L10C9JJH3 530 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 PDE6AP16499 860 aa18.69■□□□□ 0.58
SNX6-205ENST00000555648 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms