RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 SRGAP3O43295 1099 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 COL6A1P12109 1028 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 TREML2Q5T2D2 321 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.26
TDP1-212ENST00000555565 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 UBE2OQ9C0C9 1292 aaKnown RBP13.4□□□□□ -0.26
TDP1-212ENST00000555565 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 AGTPBP1Q9UPW5 1226 aa13.4□□□□□ -0.26
TDP1-212ENST00000555565 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 ZBTB22O15209 634 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 HMGCRP04035 888 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
TDP1-212ENST00000555565 TIMM10P62072 90 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 MAP3K21Q5TCX8 1036 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 CCDC84Q86UT8 332 aaPredicted RBP13.39□□□□□ -0.27
TDP1-212ENST00000555565 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
TDP1-212ENST00000555565 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 C11orf49Q9H6J7 331 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 DENND2AQ9ULE3 1009 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
TDP1-212ENST00000555565 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 COL2A1P02458 1487 aaPredicted RBP13.39□□□□□ -0.27
TDP1-212ENST00000555565 PTPRFP10586 1907 aa13.39□□□□□ -0.27
TDP1-212ENST00000555565 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
TDP1-212ENST00000555565 TRIM75PA6NK02 468 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
TDP1-212ENST00000555565 ENTPD3O75355 529 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 RGS3P49796 1198 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 TFCP2Q12800 502 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 TRIB2Q92519 343 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
TDP1-212ENST00000555565 AK9Q5TCS8 1911 aa13.38□□□□□ -0.27
TDP1-212ENST00000555565 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
TDP1-212ENST00000555565 MYH2Q9UKX2 1941 aa13.37□□□□□ -0.27
TDP1-212ENST00000555565 PRUNE2Q8WUY3 3088 aa13.37□□□□□ -0.27
TDP1-212ENST00000555565 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
TDP1-212ENST00000555565 GNAI2P04899 355 aa13.37□□□□□ -0.27
TDP1-212ENST00000555565 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
TDP1-212ENST00000555565 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 DIEXFQ68CQ4 756 aaKnown RBP13.36□□□□□ -0.27
TDP1-212ENST00000555565 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 XAGE2Q96GT9 111 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
TDP1-212ENST00000555565 AKAP2Q9Y2D5 859 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 GAKO14976 1311 aa13.36□□□□□ -0.27
TDP1-212ENST00000555565 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
TDP1-212ENST00000555565 GCLCP48506 637 aaPredicted RBP13.35□□□□□ -0.27
TDP1-212ENST00000555565 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
TDP1-212ENST00000555565 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
TDP1-212ENST00000555565 LRRC26Q2I0M4 334 aa13.35□□□□□ -0.27
TDP1-212ENST00000555565 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
TDP1-212ENST00000555565 LHX8Q68G74 356 aa13.35□□□□□ -0.27
TDP1-212ENST00000555565 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
TDP1-212ENST00000555565 TBC1D12O60347 775 aa13.34□□□□□ -0.27
TDP1-212ENST00000555565 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
TDP1-212ENST00000555565 ZGPATQ8N5A5 531 aaKnown RBP13.34□□□□□ -0.27
TDP1-212ENST00000555565 PRDM6Q9NQX0 595 aa13.34□□□□□ -0.27
TDP1-212ENST00000555565 MORF4L1Q9UBU8 362 aa13.34□□□□□ -0.27
TDP1-212ENST00000555565 ABCF2Q9UG63 623 aa13.34□□□□□ -0.27
TDP1-212ENST00000555565 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 PEX10O60683 326 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
TDP1-212ENST00000555565 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
TDP1-212ENST00000555565 SPP2Q13103 211 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 USP6NLQ92738 828 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
TDP1-212ENST00000555565 FAM161BQ96MY7 647 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
TDP1-212ENST00000555565 HMG20BQ9P0W2 317 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 DOCK2Q92608 1830 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 DOCK1Q14185 1865 aa13.33□□□□□ -0.28
TDP1-212ENST00000555565 CYP2B6P20813 491 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 RHBDL3P58872 404 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
TDP1-212ENST00000555565 G3BP1Q13283 466 aaKnown RBP eCLIP13.32□□□□□ -0.28
TDP1-212ENST00000555565 POLA2Q14181 598 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 SH3D19Q5HYK7 790 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 SPTY2D1Q68D10 685 aaPredicted RBP13.32□□□□□ -0.28
TDP1-212ENST00000555565 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
TDP1-212ENST00000555565 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
TDP1-212ENST00000555565 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
TDP1-212ENST00000555565 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 RLBP1P12271 317 aa13.31□□□□□ -0.28
TDP1-212ENST00000555565 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
TDP1-212ENST00000555565 CCND3P30281 292 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms