RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 BIN1O00499 593 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 ZNF165P49910 485 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-211ENST00000555055 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 TSC1Q92574 1164 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 ARID3AQ99856 593 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 KRT23Q9C075 422 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
XRCC3-211ENST00000555055 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 SPTLC2O15270 562 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 KINO60870 393 aaKnown RBP17.16■□□□□ 0.34
XRCC3-211ENST00000555055 GNAT2P19087 354 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
XRCC3-211ENST00000555055 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 MYH2Q9UKX2 1941 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 MYH13Q9UKX3 1938 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 CACNA1SQ13698 1873 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 CBX1P83916 185 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
XRCC3-211ENST00000555055 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 NR5A1Q13285 461 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 RTN1Q16799 776 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 ANO1Q5XXA6 986 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 RBM43Q6ZSC3 357 aaKnown RBP17.15■□□□□ 0.34
XRCC3-211ENST00000555055 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 ZHX1Q9UKY1 873 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-211ENST00000555055 TNRC6CQ9HCJ0 1690 aaKnown RBP17.15■□□□□ 0.34
XRCC3-211ENST00000555055 ERICH2A1L162 156 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 TRIM37O94972 964 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 LIFRP42702 1097 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 SSRP1Q08945 709 aaKnown RBP17.15■□□□□ 0.34
XRCC3-211ENST00000555055 TAF3Q5VWG9 929 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 ZNF654Q8IZM8 581 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
XRCC3-211ENST00000555055 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
XRCC3-211ENST00000555055 A0A1B0GUL6 1792 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
XRCC3-211ENST00000555055 ENAHQ8N8S7 591 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-211ENST00000555055 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 MTMR7Q9Y216 660 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-211ENST00000555055 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 OGFRQ9NZT2 677 aa17.14■□□□□ 0.33
XRCC3-211ENST00000555055 CDKL5O76039 1030 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
XRCC3-211ENST00000555055 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 ADALQ6DHV7 355 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 POLR3EQ9NVU0 708 aa17.13■□□□□ 0.33
XRCC3-211ENST00000555055 GRIN1Q05586 938 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 TRIM29Q14134 588 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 FANCBQ8NB91 859 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 CAVIN2O95810 425 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 GABPB1Q06547 395 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-211ENST00000555055 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-211ENST00000555055 BRAPQ7Z569 592 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 ESR2Q92731 530 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
XRCC3-211ENST00000555055 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
XRCC3-211ENST00000555055 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-211ENST00000555055 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
XRCC3-211ENST00000555055 PFKFB1P16118 471 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 SEC23AQ15436 765 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
XRCC3-211ENST00000555055 DIS3L2Q8IYB7 885 aaKnown RBP17.11■□□□□ 0.33
XRCC3-211ENST00000555055 DYNLL2Q96FJ2 89 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 ECM29Q5VYK3 1845 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 NOM1Q5C9Z4 860 aaKnown RBP17.11■□□□□ 0.33
XRCC3-211ENST00000555055 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 DRC7Q8IY82 874 aa17.11■□□□□ 0.33
XRCC3-211ENST00000555055 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
XRCC3-211ENST00000555055 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 IFNAR1P17181 557 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 PTGS1P23219 599 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
XRCC3-211ENST00000555055 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 ZSCAN10Q96SZ4 725 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-211ENST00000555055 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
XRCC3-211ENST00000555055 MCM9Q9NXL9 1143 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 CGNQ9P2M7 1197 aaKnown RBP17.1■□□□□ 0.33
XRCC3-211ENST00000555055 ZNF202O95125 648 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 GYS1P13807 737 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 VEGFAP15692 232 aaPredicted RBP17.1■□□□□ 0.33
XRCC3-211ENST00000555055 CDC25BP30305 580 aa17.1■□□□□ 0.33
XRCC3-211ENST00000555055 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms