RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 NME9Q86XW9 330 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 WFDC8Q8IUA0 241 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 TTC16Q8NEE8 873 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 OSMRQ99650 979 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 KCNK4Q9NYG8 393 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 MON2Q7Z3U7 1717 aa4.31□□□□□ -1.72
SEC23A-208ENST00000555017 PTCH1Q13635 1447 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 PPIP5K1Q6PFW1 1433 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 ADGRL3Q9HAR2 1447 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 ACEP12821 1306 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 NDUFB5O43674 189 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 MAPK1P28482 360 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 DSC3Q14574 896 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 SPRED3Q2MJR0 410 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 FMR1NBQ8N0W7 255 aaPredicted RBP4.3□□□□□ -1.72
SEC23A-208ENST00000555017 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
SEC23A-208ENST00000555017 SNX29Q8TEQ0 813 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 NXPE3Q969Y0 559 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 SPACA7Q96KW9 195 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 RNF19AQ9NV58 838 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 WWC3Q9ULE0 1092 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 CDC42BPGQ6DT37 1551 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 MAP2P11137 1827 aaKnown RBP4.3□□□□□ -1.72
SEC23A-208ENST00000555017 RGPD5Q99666 1765 aa4.3□□□□□ -1.72
SEC23A-208ENST00000555017 MST1RQ04912 1400 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 NSD3Q9BZ95 1437 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 PIK3R4Q99570 1358 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 SBNO2Q9Y2G9 1366 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 NRKQ7Z2Y5 1582 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 A0A1W2PP55 124 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 PDE2AO00408 941 aaPredicted RBP4.29□□□□□ -1.72
SEC23A-208ENST00000555017 EIF1AYO14602 144 aaKnown RBP4.29□□□□□ -1.72
SEC23A-208ENST00000555017 WISP1O95388 367 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 RPLP1P05386 114 aaKnown RBP4.29□□□□□ -1.72
SEC23A-208ENST00000555017 SPATA31C1P0DKV0 1188 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 USP5P45974 858 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 GRIA4P48058 902 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 KCNA1Q09470 495 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 DOC2BQ14184 412 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 FBXO11Q86XK2 927 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 YTHDC1Q96MU7 727 aaKnown RBP4.29□□□□□ -1.72
SEC23A-208ENST00000555017 RBCK1Q9BYM8 510 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 MUC3BQ9H195 1237 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 RBSNQ9H1K0 784 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 NPHS2Q9NP85 383 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 NOP53Q9NZM5 478 aaKnown RBP4.29□□□□□ -1.72
SEC23A-208ENST00000555017 DCTN4Q9UJW0 460 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 RGPD2P0DJD1 1756 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 PIK3C2AO00443 1686 aa4.29□□□□□ -1.72
SEC23A-208ENST00000555017 ZBTB7CA1YPR0 619 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 DLL1O00548 723 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 SOX1O00570 391 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 FYB1O15117 783 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 SMNDC1O75940 238 aaKnown RBP eCLIP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 CDC27P30260 824 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 PIP4K2BP78356 416 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 EHHADHQ08426 723 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 FOXD4L6Q3SYB3 417 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 PRRT3Q5FWE3 981 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 FOXD4L3Q6VB84 417 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 VN1R5Q7Z5H4 357 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 GALNT12Q8IXK2 581 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 AGGF1Q8N302 714 aaeCLIP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 ASAP3Q8TDY4 903 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 KLHDC7BQ96G42 594 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 TCF12Q99081 682 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 C19orf44Q9H6X5 657 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 PPME1Q9Y570 386 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 PEAK1Q9H792 1746 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 TRPM3Q9HCF6 1732 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 ANKRD26Q9UPS8 1709 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 C1orf167Q5SNV9 1468 aa4.28□□□□□ -1.72
SEC23A-208ENST00000555017 CPSF1Q10570 1443 aaKnown RBP4.28□□□□□ -1.72
SEC23A-208ENST00000555017 KTN1Q86UP2 1357 aaKnown RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ROBO1Q9Y6N7 1651 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ADAM11O75078 769 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 FURINP09958 794 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ELNP15502 786 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ATF3P18847 181 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 NOS3P29474 1203 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 NRG1Q02297 640 aaPredicted RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 BRINP3Q76B58 766 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 KRT28Q7Z3Y7 464 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 NGDNQ8NEJ9 315 aaKnown RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 FOXD4L4Q8WXT5 416 aaPredicted RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 SLC7A3Q8WY07 619 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 PMEPA1Q969W9 287 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 CCDC74AQ96AQ1 378 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 CSRNP1Q96S65 589 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ADAM19Q9H013 955 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 PRKRIP1Q9H875 184 aaPredicted RBP4.27□□□□□ -1.73
SEC23A-208ENST00000555017 SOX13Q9UN79 622 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 KNSTRNQ9Y448 316 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 ANKRD36BQ8N2N9 1353 aa4.27□□□□□ -1.73
SEC23A-208ENST00000555017 TTC21BQ7Z4L5 1316 aa4.26□□□□□ -1.73
SEC23A-208ENST00000555017 FSCN2O14926 492 aa4.26□□□□□ -1.73
SEC23A-208ENST00000555017 TREHO43280 583 aa4.26□□□□□ -1.73
SEC23A-208ENST00000555017 ANP32CO43423 234 aa4.26□□□□□ -1.73
SEC23A-208ENST00000555017 CPNE3O75131 537 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms