RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CD163Q86VB7 1156 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 ELOA3Q8NG57 546 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-229ENST00000554672 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
ATXN3-229ENST00000554672 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-229ENST00000554672 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 PPP1R12BO60237 982 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-229ENST00000554672 CHRNA4P43681 627 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-229ENST00000554672 SUSD3Q96L08 255 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 C2orf49Q9BVC5 232 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-229ENST00000554672 NEUROD4Q9HD90 331 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
ATXN3-229ENST00000554672 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 SIN3BO75182 1162 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 LGR5O75473 907 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 STARD3NLO95772 234 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 ALDH16A1Q8IZ83 802 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 STAG2Q8N3U4 1231 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 GAS2L2Q8NHY3 880 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
ATXN3-229ENST00000554672 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
ATXN3-229ENST00000554672 A6NJR5 290 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 PIK3R2O00459 728 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
ATXN3-229ENST00000554672 EPHX2P34913 555 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ATXN3-229ENST00000554672 SEC13P55735 322 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 TYRO3Q06418 890 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 PTK7Q13308 1070 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 CRTC2Q53ET0 693 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-229ENST00000554672 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 CEP63Q96MT8 703 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 BRD7Q9NPI1 651 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-229ENST00000554672 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATXN3-229ENST00000554672 ITGB4P16144 1822 aa6.57□□□□□ -1.36
ATXN3-229ENST00000554672 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
ATXN3-229ENST00000554672 FURINP09958 794 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-229ENST00000554672 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-229ENST00000554672 NOP53Q9NZM5 478 aaKnown RBP6.56□□□□□ -1.36
ATXN3-229ENST00000554672 ANKIB1Q9P2G1 1089 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 COL15A1P39059 1388 aa6.56□□□□□ -1.36
ATXN3-229ENST00000554672 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 NPHP1O15259 732 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 DPYDQ12882 1025 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-229ENST00000554672 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-229ENST00000554672 NPM2Q86SE8 214 aaKnown RBP6.55□□□□□ -1.36
ATXN3-229ENST00000554672 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 MICALL1Q8N3F8 863 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
ATXN3-229ENST00000554672 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-229ENST00000554672 KCNH4Q9UQ05 1017 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 CHMP3Q9Y3E7 222 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
ATXN3-229ENST00000554672 K7ELQ4 463 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 M0R082 166 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 ALBP02768 609 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 ALAS2P22557 587 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 IL13P35225 146 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 FKBP4Q02790 459 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-229ENST00000554672 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
ATXN3-229ENST00000554672 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms