RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 PDE12Q6L8Q7 609 aaKnown RBP6.99□□□□□ -1.29
ATXN3-228ENST00000554592 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 NSUN5Q96P11 429 aaKnown RBP6.99□□□□□ -1.29
ATXN3-228ENST00000554592 TUT1Q9H6E5 874 aaKnown RBP6.99□□□□□ -1.29
ATXN3-228ENST00000554592 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
ATXN3-228ENST00000554592 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-228ENST00000554592 FZD6O60353 706 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 KIF4AO95239 1232 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 CYP2E1P05181 493 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 MZF1P28698 734 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 FKBP4Q02790 459 aaKnown RBP eCLIP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 GRIK4Q16099 956 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 PRRT3Q5FWE3 981 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 ACSBG1Q96GR2 724 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
ATXN3-228ENST00000554592 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-228ENST00000554592 A6NHS1 94 aa6.97□□□□□ -1.29
ATXN3-228ENST00000554592 SELPP16109 830 aa6.97□□□□□ -1.29
ATXN3-228ENST00000554592 HSPA6P17066 643 aa6.97□□□□□ -1.29
ATXN3-228ENST00000554592 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
ATXN3-228ENST00000554592 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
ATXN3-228ENST00000554592 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
ATXN3-228ENST00000554592 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
ATXN3-228ENST00000554592 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-228ENST00000554592 CCDC7Q96M83 1385 aa6.96□□□□□ -1.29
ATXN3-228ENST00000554592 ADAM23O75077 832 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 FAM13AO94988 1023 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 ADAMTSL4Q6UY14 1074 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 FOXD4L4Q8WXT5 416 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-228ENST00000554592 TFCP2L1Q9NZI6 479 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 POLIQ9UNA4 740 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 UTRNP46939 3433 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 CRYBG1Q9Y4K1 1723 aa6.96□□□□□ -1.3
ATXN3-228ENST00000554592 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 USP6P35125 1406 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 DEAF1O75398 565 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 GHRHP01286 108 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 IL2RBP14784 551 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 ELNP15502 786 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 DTWD1Q8N5C7 304 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 CEP120Q8N960 986 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 NLRP2Q9NX02 1062 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 LMO7Q8WWI1 1683 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
ATXN3-228ENST00000554592 CENPJQ9HC77 1338 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-228ENST00000554592 MYOM1P52179 1685 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 ATP11AP98196 1134 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 HYAL2Q12891 473 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 XP32Q5T750 250 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 LENG1Q96BZ8 264 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-228ENST00000554592 CCDC87Q9NVE4 849 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ATXN3-228ENST00000554592 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
ATXN3-228ENST00000554592 TM4SF5O14894 197 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
ATXN3-228ENST00000554592 ADGRE1Q14246 886 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 GJD3Q8N144 294 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 TTC21AQ8NDW8 1320 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ATXN3-228ENST00000554592 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-228ENST00000554592 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 NFKBIEO00221 500 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 GATA4P43694 442 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 RAC1P63000 192 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 GDF6Q6KF10 455 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-228ENST00000554592 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
ATXN3-228ENST00000554592 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
ATXN3-228ENST00000554592 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
ATXN3-228ENST00000554592 C9orf172C9J069 976 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 DLL1O00548 723 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms