RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 GHRHP01286 108 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 EIF2AK2P19525 551 aaKnown RBP6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 RPS26P62854 115 aaKnown RBP6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 SERINC3Q13530 473 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 FAM196AQ6ZSG2 479 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 UBE2OQ9C0C9 1292 aaKnown RBP6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 PCDHB5Q9Y5E4 795 aa6.29□□□□□ -1.4
PPP4R3A-204ENST00000554574 A2ML1A8K2U0 1454 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 C2CD2LO14523 706 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 COL9A2Q14055 689 aaPredicted RBP6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 CEP135Q66GS9 1140 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZNF746Q6NUN9 644 aaPredicted RBP6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 ZMYM3Q14202 1370 aa6.28□□□□□ -1.4
PPP4R3A-204ENST00000554574 ASXL1Q8IXJ9 1541 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ALKQ9UM73 1620 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 F13A1P00488 732 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 NBPF6Q5VWK0 638 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ANKS3Q6ZW76 656 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 JAZF1Q86VZ6 243 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 NKD1Q969G9 470 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 KIFC2Q96AC6 838 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 NBPF4Q96M43 638 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 CDC14CA4D256 554 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 K7ELQ4 463 aaPredicted RBP6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 KLF4O43474 513 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 CPB1P15086 417 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 PCBP4P57723 403 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 RALBP1Q15311 655 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ZNF423Q2M1K9 1284 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 SEZ6Q53EL9 994 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 CCDC81Q6ZN84 652 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 SLITRK4Q8IW52 837 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 BSNDQ8WZ55 320 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 ANAPC16Q96DE5 110 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 TRERF1Q96PN7 1200 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 CLEC4MQ9H2X3 399 aaPredicted RBP6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 SENP2Q9HC62 589 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 PPT2Q9UMR5 302 aa6.27□□□□□ -1.41
PPP4R3A-204ENST00000554574 PARD3Q8TEW0 1356 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 NRXN3Q9Y4C0 1643 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SMNDC1O75940 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 B3GALT4O96024 378 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 BMP6P22004 513 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SEPT6Q14141 434 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 MLECQ14165 292 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 CCDC184Q52MB2 194 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SDE2Q6IQ49 451 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 Q6ZNB5 142 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 VN1R5Q7Z5H4 357 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 FAM35AQ86V20 835 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 STK35Q8TDR2 534 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 HNRNPLLQ8WVV9 542 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 PLD4Q96BZ4 506 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SRRTQ9BXP5 876 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 RBSNQ9H1K0 784 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 GMPR2Q9P2T1 348 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SLC6A14Q9UN76 642 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SOX13Q9UN79 622 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 CENPJQ9HC77 1338 aaPredicted RBP6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 KNDC1Q76NI1 1749 aa6.26□□□□□ -1.41
PPP4R3A-204ENST00000554574 SIN3BO75182 1162 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 SNRPBP14678 240 aaKnown RBP6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PCSK7Q16549 785 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PERM1Q5SV97 790 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 VWA5B2Q8N398 1253 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 CPLX3Q8WVH0 158 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 SHDQ96IW2 340 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 LRRC3Q9BY71 257 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 TRIM33Q9UPN9 1127 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 MYBBP1AQ9BQG0 1328 aaKnown RBP6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 BRD4O60885 1362 aaPredicted RBP6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 USP32Q8NFA0 1604 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PTPRMP28827 1452 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 NLRP1Q9C000 1473 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 TNRQ92752 1358 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 FAM221AA4D161 298 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 ANKRD62A6NC57 917 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PPFIA3O75145 1194 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 BMP4P12644 408 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 GATAD2BQ8WXI9 593 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 MIR1-1HGQ9H1L0 117 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 PANK3Q9H999 370 aa6.25□□□□□ -1.41
PPP4R3A-204ENST00000554574 KLF15Q9UIH9 416 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms