RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 PIK3C2BO00750 1634 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 KIF24Q5T7B8 1368 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 SALL3Q9BXA9 1300 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 CHL1O00533 1208 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 SIAH2O43255 324 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 MAN1A2O60476 641 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 NR3C2P08235 984 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 MX1P20591 662 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 BRD2P25440 801 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 MZF1P28698 734 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 DNM1Q05193 864 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 COL9A3Q14050 684 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 PPP1R26Q5T8A7 1209 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 UTP14CQ5TAP6 766 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 ALG1LQ6GMV1 187 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 CYP2U1Q7Z449 544 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 PDCL2Q8N4E4 241 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 GPR161Q8N6U8 529 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 KIAA1524Q8TCG1 905 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 INTS4Q96HW7 963 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 LRRCC1Q9C099 1032 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 ARHGEF10LQ9HCE6 1279 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 SRA1Q9HD15 236 aaKnown RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-207ENST00000554439 AK5Q9Y6K8 562 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 HECW2Q9P2P5 1572 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 TUBGCP6Q96RT7 1819 aa3.05□□□□□ -1.92
PRPF39-207ENST00000554439 WDR33Q9C0J8 1336 aaKnown RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ZSCAN22P10073 491 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 SYT1P21579 422 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 PTGS1P23219 599 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 MCCP23508 829 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 MCM2P49736 904 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 RBL2Q08999 1139 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 LMOD3Q0VAK6 560 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 LRMPQ12912 555 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 EIF4A2Q14240 407 aaKnown RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CAMK4Q16566 473 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 FAM173BQ6P4H8 233 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 RUFY3Q7L099 469 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ALDH16A1Q8IZ83 802 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 WHAMMQ8TF30 809 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 EDEM1Q92611 657 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ARMC5Q96C12 935 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CRELD1Q96HD1 420 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CSRNP1Q96S65 589 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 FUCA2Q9BTY2 467 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 NRBP1Q9UHY1 535 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 BCS1LQ9Y276 419 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 PCDHGB7Q9Y5F8 929 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ASXL2Q76L83 1435 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CLTCQ00610 1675 aaKnown RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 KIAA0232Q92628 1395 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 STX6O43752 255 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 HMMRO75330 724 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 GNAI2P04899 355 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 NOS2P35228 1153 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ZAP70P43403 619 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 AK2P54819 239 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 UBE2HP62256 183 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ATP2B2Q01814 1243 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 DHX9Q08211 1270 aaKnown RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 DGKZQ13574 1117 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 ARID5BQ14865 1188 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 TEAD4Q15561 434 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 UVSSAQ2YD98 709 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CCDC144BQ3MJ40 725 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 LUZP1Q86V48 1076 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CCDC83Q8IWF9 413 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 FAM184AQ8NB25 1140 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 FBF1Q8TES7 1133 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 C7orf43Q8WVR3 580 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 C16orf45Q96MC5 204 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 FHDC1Q9C0D6 1143 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 PIF1Q9H611 641 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CCSER2Q9H7U1 834 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 KLK14Q9P0G3 267 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 SPG7Q9UQ90 795 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 SNX14Q9Y5W7 946 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 LRRFIP2Q9Y608 721 aaKnown RBP3.04□□□□□ -1.92
PRPF39-207ENST00000554439 CPS1P31327 1500 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 PTPRCP08575 1304 aa3.04□□□□□ -1.92
PRPF39-207ENST00000554439 A6NHS1 94 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 PIK3R2O00459 728 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 OPLAHO14841 1288 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 ADH1CP00326 375 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 F13A1P00488 732 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 CELA2BP08218 269 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-207ENST00000554439 HSPA4P34932 840 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 ANAPC15P60006 121 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 PTPN12Q05209 780 aaKnown RBP3.03□□□□□ -1.92
PRPF39-207ENST00000554439 NCBP1Q09161 790 aaKnown RBP3.03□□□□□ -1.92
PRPF39-207ENST00000554439 RTN1Q16799 776 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 C11orf91Q3C1V1 193 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 ADCK5Q3MIX3 580 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 HSP90AB2PQ58FF8 381 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 ESCO1Q5FWF5 840 aa3.03□□□□□ -1.92
PRPF39-207ENST00000554439 CWC27Q6UX04 472 aaKnown RBP3.03□□□□□ -1.92
PRPF39-207ENST00000554439 SV2AQ7L0J3 742 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms