RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
SCFD1-211ENST00000554437 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-211ENST00000554437 ZNF654Q8IZM8 581 aa8.33□□□□□ -1.08
SCFD1-211ENST00000554437 SEMA6CQ9H3T2 930 aa8.33□□□□□ -1.08
SCFD1-211ENST00000554437 C7orf69Q9H7B7 122 aa8.33□□□□□ -1.08
SCFD1-211ENST00000554437 LGR6Q9HBX8 967 aa8.33□□□□□ -1.08
SCFD1-211ENST00000554437 GFRA2O00451 464 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 FANCGO15287 622 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 TLR3O15455 904 aaKnown RBP8.32□□□□□ -1.08
SCFD1-211ENST00000554437 GREM1O60565 184 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 NEFMP07197 916 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 ITGB7P26010 798 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 RING1Q06587 406 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 FBXO27Q8NI29 283 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-211ENST00000554437 KCNQ5Q9NR82 932 aa8.32□□□□□ -1.08
SCFD1-211ENST00000554437 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-211ENST00000554437 DYRK3O43781 588 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-211ENST00000554437 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
SCFD1-211ENST00000554437 MPP2Q14168 576 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 ZBTB37Q5TC79 503 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 ISL2Q96A47 359 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 UBP1Q9NZI7 540 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 PCOLCE2Q9UKZ9 415 aa8.31□□□□□ -1.08
SCFD1-211ENST00000554437 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
SCFD1-211ENST00000554437 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
SCFD1-211ENST00000554437 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
SCFD1-211ENST00000554437 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
SCFD1-211ENST00000554437 ROBO2Q9HCK4 1378 aa8.3□□□□□ -1.08
SCFD1-211ENST00000554437 DYNC1LI2O43237 492 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-211ENST00000554437 GRK4P32298 578 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 NTF4P34130 210 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
SCFD1-211ENST00000554437 ZNF507Q8TCN5 953 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-211ENST00000554437 NT5C1AQ9BXI3 368 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 CCSER2Q9H7U1 834 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 TACC3Q9Y6A5 838 aa8.29□□□□□ -1.08
SCFD1-211ENST00000554437 FSTP19883 344 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 CRKP46108 304 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 PDE4BQ07343 736 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 RAD51AP2Q09MP3 1159 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 SEZ6Q53EL9 994 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 RNF43Q68DV7 783 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 KCT2Q8NC54 265 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 NKD1Q969G9 470 aa8.28□□□□□ -1.08
SCFD1-211ENST00000554437 GRIN3BO60391 1043 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 PGRP06401 933 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 PAK2Q13177 524 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 UBE3DQ7Z6J8 389 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 LRRC3Q9BY71 257 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 ACBD3Q9H3P7 528 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 IGSF5Q9NSI5 407 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 PRKAG2Q9UGJ0 569 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.09
SCFD1-211ENST00000554437 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 GSC2O15499 205 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 IGLV1-40P01703 118 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 PLCG1P19174 1290 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 NFIAQ12857 509 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 SEZ6L2Q6UXD5 910 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 HID1Q8IV36 788 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 FBXL6Q8N531 539 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 MFSD14AQ96MC6 490 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 TBC1D32Q96NH3 1257 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 FBRSQ9HAH7 460 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 BRMS1Q9HCU9 246 aa8.26□□□□□ -1.09
SCFD1-211ENST00000554437 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-211ENST00000554437 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
SCFD1-211ENST00000554437 MCM4P33991 863 aa8.25□□□□□ -1.09
SCFD1-211ENST00000554437 CDK5R2Q13319 367 aa8.25□□□□□ -1.09
SCFD1-211ENST00000554437 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
SCFD1-211ENST00000554437 C1GALT1Q9NS00 363 aa8.25□□□□□ -1.09
SCFD1-211ENST00000554437 PRSS36Q5K4E3 855 aa8.24□□□□□ -1.09
SCFD1-211ENST00000554437 ZAR1Q86SH2 424 aa8.24□□□□□ -1.09
SCFD1-211ENST00000554437 SLITRK4Q8IW52 837 aa8.24□□□□□ -1.09
SCFD1-211ENST00000554437 GIMAP7Q8NHV1 300 aa8.24□□□□□ -1.09
SCFD1-211ENST00000554437 INPP5FQ9Y2H2 1132 aa8.24□□□□□ -1.09
SCFD1-211ENST00000554437 ADMP35318 185 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 TNNI2P48788 182 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 SLBPQ14493 270 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCFD1-211ENST00000554437 NKG7Q16617 165 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 GPRASP2Q96D09 838 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 REV1Q9UBZ9 1251 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 ADAM30Q9UKF2 790 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 PCDHB14Q9Y5E9 798 aa8.23□□□□□ -1.09
SCFD1-211ENST00000554437 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 HTR3BO95264 441 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 ZNF165P49910 485 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 GK5Q6ZS86 529 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 ARMCX6Q7L4S7 300 aa8.22□□□□□ -1.09
SCFD1-211ENST00000554437 SHISA5Q8N114 240 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms