RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
LINC00640-201ENST00000554409 MYH7P12883 1935 aa9.18□□□□□ -0.94
LINC00640-201ENST00000554409 PLCG2P16885 1265 aa9.18□□□□□ -0.94
LINC00640-201ENST00000554409 GTF2A2P52657 109 aa9.18□□□□□ -0.94
LINC00640-201ENST00000554409 DDX60LQ5H9U9 1706 aaKnown RBP9.18□□□□□ -0.94
LINC00640-201ENST00000554409 MIGA2Q7L4E1 593 aa9.18□□□□□ -0.94
LINC00640-201ENST00000554409 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
LINC00640-201ENST00000554409 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
LINC00640-201ENST00000554409 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
LINC00640-201ENST00000554409 NOL10Q9BSC4 688 aaKnown RBP9.18□□□□□ -0.94
LINC00640-201ENST00000554409 PTPRFP10586 1907 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 MYH1P12882 1939 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 DDTLA6NHG4 134 aaPredicted RBP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 PHF20L1A8MW92 1017 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 APBB1O00213 710 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 IGF2BP3O00425 579 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 TBC1D12O60347 775 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 INPP5BP32019 993 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 PPATQ06203 517 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 PPIL2Q13356 520 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 PICALMQ13492 652 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 TTF1Q15361 905 aaPredicted RBP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 ADGRA1Q86SQ6 560 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 ZKSCAN4Q969J2 545 aaPredicted RBP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 OTUD5Q96G74 571 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 LRRCC1Q9C099 1032 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
LINC00640-201ENST00000554409 ANTXR1Q9H6X2 564 aa9.17□□□□□ -0.94
LINC00640-201ENST00000554409 GPR25O00155 361 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 IRF6O14896 467 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 IDH1O75874 414 aaKnown RBP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 ATP5JP18859 108 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 TEX11Q8IYF3 940 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 PTPN18Q99952 460 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 DHX36Q9H2U1 1008 aaKnown RBP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 DCTPP1Q9H773 170 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 ZCCHC17Q9NP64 241 aaKnown RBP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 AATFQ9NY61 560 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
LINC00640-201ENST00000554409 KCNH4Q9UQ05 1017 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 NAV1Q8NEY1 1877 aa9.16□□□□□ -0.94
LINC00640-201ENST00000554409 FLT1P17948 1338 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 STK25O00506 426 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CTNND1O60716 968 aaKnown RBP9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CETPP11597 493 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CYP7A1P22680 504 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 SNAPC2Q13487 334 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 DGKZQ13574 1117 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 AAMPQ13685 434 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CCL15Q16663 113 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 CTU1Q7Z7A3 348 aaKnown RBP9.15□□□□□ -0.94
LINC00640-201ENST00000554409 SCYL3Q8IZE3 742 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 MAGEB6Q8N7X4 407 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
LINC00640-201ENST00000554409 BRI3BPQ8WY22 251 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 ABHD8Q96I13 439 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 MCOLN1Q9GZU1 580 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 R3HDMLQ9H3Y0 253 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 PCDHB15Q9Y5E8 787 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 NDUFB9Q9Y6M9 179 aa9.15□□□□□ -0.94
LINC00640-201ENST00000554409 LOC285556D6RIA3 1793 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 FKTNO75072 461 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 PTPRAP18433 802 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 CRHR2Q13324 411 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
LINC00640-201ENST00000554409 TGFBRAP1Q8WUH2 860 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 CRBNQ96SW2 442 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 HAUS7Q99871 368 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00640-201ENST00000554409 PI4KBQ9UBF8 816 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 HERC5Q9UII4 1024 aaKnown RBP9.14□□□□□ -0.95
LINC00640-201ENST00000554409 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
LINC00640-201ENST00000554409 TCRBV5S4A2TA0A5A2 114 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 GOLIM4O00461 696 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 CXCL11O14625 94 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 SMARCA5O60264 1052 aaPredicted RBP9.13□□□□□ -0.95
LINC00640-201ENST00000554409 PDE6AP16499 860 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 DYNLL1P63167 89 aaKnown RBP9.13□□□□□ -0.95
LINC00640-201ENST00000554409 PKN2Q16513 984 aaKnown RBP9.13□□□□□ -0.95
LINC00640-201ENST00000554409 SLC9C2Q5TAH2 1124 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 ANKRD23Q86SG2 305 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 MAPKAPK5Q8IW41 473 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 FAM43AQ8N2R8 423 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
LINC00640-201ENST00000554409 RIOK1Q9BRS2 568 aaKnown RBP9.13□□□□□ -0.95
LINC00640-201ENST00000554409 TBC1D2Q9BYX2 928 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 PAG1Q9NWQ8 432 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 AFG3L2Q9Y4W6 797 aa9.13□□□□□ -0.95
LINC00640-201ENST00000554409 A0A0G2JLL6 359 aaPredicted RBP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 BTBD19C9JJ37 291 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms