RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PLAURQ03405 335 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 COL9A3Q14050 684 aaPredicted RBP7.6□□□□□ -1.19
VPS33B-203ENST00000554264 C8orf34Q49A92 452 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 XKR5Q6UX68 686 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 HFE2Q6ZVN8 426 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 ARHGEF25Q86VW2 580 aa7.6□□□□□ -1.19
VPS33B-203ENST00000554264 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.6□□□□□ -1.19
VPS33B-203ENST00000554264 NPC1L1Q9UHC9 1359 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 AKAP12Q02952 1782 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 CHD4Q14839 1912 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 FAM181BA6NEQ2 426 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 J3QW42 95 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 ALAS2P22557 587 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 POLD1P28340 1107 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 MARSP56192 900 aaKnown RBP7.59□□□□□ -1.19
VPS33B-203ENST00000554264 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 GJD3Q8N144 294 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 MICALL1Q8N3F8 863 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 FNDC3AQ9Y2H6 1198 aaKnown RBP7.59□□□□□ -1.19
VPS33B-203ENST00000554264 TNS2Q63HR2 1409 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 WNK3Q9BYP7 1800 aa7.59□□□□□ -1.19
VPS33B-203ENST00000554264 GPLD1P80108 840 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 PDE12Q6L8Q7 609 aaKnown RBP7.58□□□□□ -1.2
VPS33B-203ENST00000554264 C1orf127Q8N9H9 656 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 OR13H1Q8NG92 308 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 NSUN5Q96P11 429 aaKnown RBP7.58□□□□□ -1.2
VPS33B-203ENST00000554264 BACH2Q9BYV9 841 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 CHRDQ9H2X0 955 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 ABI2Q9NYB9 513 aaPredicted RBP7.58□□□□□ -1.2
VPS33B-203ENST00000554264 COL18A1P39060 1754 aa7.58□□□□□ -1.2
VPS33B-203ENST00000554264 ABCC6O95255 1503 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 TTC21AQ8NDW8 1320 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 M0R082 166 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 IGHA2P01877 340 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
VPS33B-203ENST00000554264 CPB1P15086 417 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 NRLP54845 237 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 TMF1P82094 1093 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 PERM1Q5SV97 790 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 ZNF438Q7Z4V0 828 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 FAM35AQ86V20 835 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 ZNF417Q8TAU3 575 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 NUDT8Q8WV74 236 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 ZNF587Q96SQ5 575 aaPredicted RBP7.57□□□□□ -1.2
VPS33B-203ENST00000554264 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 SUV39H2Q9H5I1 410 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 NHSQ6T4R5 1651 aa7.57□□□□□ -1.2
VPS33B-203ENST00000554264 PAPPAQ13219 1627 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 TTC21BQ7Z4L5 1316 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 EVC2Q86UK5 1308 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 GRIN3BO60391 1043 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 PSAPP07602 524 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 IL2RBP14784 551 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 SIK1P57059 783 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 ZNF827Q17R98 1081 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
VPS33B-203ENST00000554264 PSAPL1Q6NUJ1 521 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 CENPQQ7L2Z9 268 aaPredicted RBP7.56□□□□□ -1.2
VPS33B-203ENST00000554264 TRIM11Q96F44 468 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 ACSBG1Q96GR2 724 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 FOXD3Q9UJU5 478 aaPredicted RBP7.56□□□□□ -1.2
VPS33B-203ENST00000554264 PIK3C2AO00443 1686 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 QRICH2Q9H0J4 1663 aa7.56□□□□□ -1.2
VPS33B-203ENST00000554264 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 RPLP1P05386 114 aaKnown RBP7.55□□□□□ -1.2
VPS33B-203ENST00000554264 PCSK2P16519 638 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 SOX18P35713 384 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 GRIK5Q16478 980 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
VPS33B-203ENST00000554264 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
VPS33B-203ENST00000554264 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
VPS33B-203ENST00000554264 NFAT5O94916 1531 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 NID1P14543 1247 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 COL8A1P27658 744 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 USP5P45974 858 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 ADAMTSL4Q6UY14 1074 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 SCARF2Q96GP6 870 aaPredicted RBP7.54□□□□□ -1.2
VPS33B-203ENST00000554264 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 PRDM6Q9NQX0 595 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 TFCP2L1Q9NZI6 479 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 UTRNP46939 3433 aa7.54□□□□□ -1.2
VPS33B-203ENST00000554264 PNPLA7Q6ZV29 1317 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 KIF4AO95239 1232 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 ACPPP15309 386 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 IRS1P35568 1242 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
VPS33B-203ENST00000554264 PCSK7Q16549 785 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 POLR3GLQ9BT43 218 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
VPS33B-203ENST00000554264 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 MKL2Q9ULH7 1088 aa7.53□□□□□ -1.2
VPS33B-203ENST00000554264 USP31Q70CQ4 1352 aa7.52□□□□□ -1.21
VPS33B-203ENST00000554264 EREGO14944 169 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms