RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	CFAP45	Q9UL16	551 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	TBC1D2B	Q9UPU7	963 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	BRWD3	Q6RI45	1802 aa		6.91	□□□□□ -1.3
RAD51B-219	ENST00000554244	LRRC37A	A6NMS7	1700 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	DDX60L	Q5H9U9	1706 aa	Known RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	LOC102724428	A0A0B4J2F2	783 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	TCRBV5S4A2T	A0A5A2	114 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	GOLGA6L4	A6NEF3	574 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	NTSR2	O95665	410 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	FGA	P02671	866 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	ATP6V1A	P38606	617 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	SIK1	P57059	783 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	ANTXR2	P58335	489 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	HAND2	P61296	217 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	ITPK1	Q13572	414 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	ALX1	Q15699	326 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	SUSD4	Q5VX71	490 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	RALYL	Q86SE5	291 aa	Known RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	MARCH10	Q8NA82	808 aa	Predicted RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	SMARCC1	Q92922	1105 aa	Predicted RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	HLA-C	Q95604	372 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	PGBD1	Q96JS3	809 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	ZNF396	Q96N95	335 aa	Predicted RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	UTP14A	Q9BVJ6	771 aa	Known RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	PRR14	Q9BWN1	585 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	TFIP11	Q9UBB9	837 aa	Known RBP	6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	USP25	Q9UHP3	1055 aa		6.9	□□□□□ -1.3
RAD51B-219	ENST00000554244	NID2	Q14112	1375 aa		6.9	□□□□□ -1.31
RAD51B-219	ENST00000554244	KLF18	A0A0U1RQI7	1052 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	MOXD2P	A6NHM9	499 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	GOLGA8B	A8MQT2	603 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	ZNF213	O14771	459 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	HOXA2	O43364	376 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	OFD1	O75665	1012 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	PTMA	P06454	111 aa	Known RBP	6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	NDUFV2	P19404	249 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	ADD1	P35611	737 aa	Known RBP	6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	USP46	P62068	366 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	CCT2	P78371	535 aa	Known RBP	6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	TYRO3	Q06418	890 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	CCDC152	Q4G0S7	254 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	SLC9C2	Q5TAH2	1124 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	MYSM1	Q5VVJ2	828 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	CHST3	Q7LGC8	479 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	TBC1D10C	Q8IV04	446 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	FAM200A	Q8TCP9	573 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	BICD2	Q8TD16	824 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	TNMD	Q9H2S6	317 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	NCOA5	Q9HCD5	579 aa	Known RBP	6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	DACT1	Q9NYF0	836 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	RCOR1	Q9UKL0	485 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	WWC3	Q9ULE0	1092 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	ZNF652	Q9Y2D9	606 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	MRVI1	Q9Y6F6	885 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	ZNF532	Q9HCE3	1301 aa		6.89	□□□□□ -1.31
RAD51B-219	ENST00000554244	ANKRD31	Q8N7Z5	1873 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	COL1A1	P02452	1464 aa	Predicted RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	PNPLA7	Q6ZV29	1317 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	CNTNAP4	Q9C0A0	1308 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	SH2B2	O14492	632 aa	Predicted RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	DHX16	O60231	1041 aa	Known RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	IDH1	O75874	414 aa	Known RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	ADAMTS2	O95450	1211 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	ADCY5	O95622	1261 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	FDPS	P14324	419 aa	Known RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	IGHMBP2	P38935	993 aa	Known RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	TRDN	Q13061	729 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	RASGRF1	Q13972	1273 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	DIXDC1	Q155Q3	683 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	TJAP1	Q5JTD0	557 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	MORN1	Q5T089	497 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	BLOC1S3	Q6QNY0	202 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	SPATA5	Q8NB90	893 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	ACSBG1	Q96GR2	724 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	C8orf76	Q96K31	380 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	USP28	Q96RU2	1077 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	STRBP	Q96SI9	672 aa	Known RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	MPHOSPH8	Q99549	860 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	ORC3	Q9UBD5	711 aa	Predicted RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	NAP1L2	Q9ULW6	460 aa	Predicted RBP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	NIP7	Q9Y221	180 aa	Known RBP eCLIP	6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	PCDHB3	Q9Y5E6	796 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	MYH4	Q9Y623	1939 aa		6.88	□□□□□ -1.31
RAD51B-219	ENST00000554244	ZNF804B	A4D1E1	1349 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	NEDD4	P46934	1319 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	STK36	Q9NRP7	1315 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	CTAGE5	O15320	804 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	NR1I2	O75469	434 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	CDKL5	O76039	1030 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	YEATS4	O95619	227 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	CAVIN2	O95810	425 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	GNAT2	P19087	354 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	TERF1	P54274	439 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	GUCA2A	Q02747	115 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	MAP3K12	Q12852	859 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	GRIPAP1	Q4V328	841 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	SH3D19	Q5HYK7	790 aa		6.87	□□□□□ -1.31
RAD51B-219	ENST00000554244	CLEC4G	Q6UXB4	293 aa		6.87	□□□□□ -1.31

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