RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FSD1Q9BTV5 496 aa28.05■■■□□ 2.08
NEK9-203ENST00000553945 HLA-DOAP06340 250 aa28.04■■■□□ 2.08
NEK9-203ENST00000553945 ZFYP08048 801 aaPredicted RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 HSPA8P11142 646 aaKnown RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 LRRFIP1Q32MZ4 808 aaKnown RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 CRACR2BQ8N4Y2 399 aaPredicted RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 TRIM34Q9BYJ4 488 aa28.04■■■□□ 2.08
NEK9-203ENST00000553945 PUS7LQ9H0K6 701 aaKnown RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 RNF186Q9NXI6 227 aa28.04■■■□□ 2.08
NEK9-203ENST00000553945 HERC5Q9UII4 1024 aaKnown RBP28.04■■■□□ 2.08
NEK9-203ENST00000553945 LAMB1P07942 1786 aa28.04■■■□□ 2.08
NEK9-203ENST00000553945 TRPA1O75762 1119 aa28.03■■■□□ 2.08
NEK9-203ENST00000553945 SCYL3Q8IZE3 742 aa28.03■■■□□ 2.08
NEK9-203ENST00000553945 SDR42E1Q8WUS8 393 aa28.03■■■□□ 2.08
NEK9-203ENST00000553945 PICK1Q9NRD5 415 aa28.03■■■□□ 2.08
NEK9-203ENST00000553945 LBX1P52954 281 aa28.02■■■□□ 2.08
NEK9-203ENST00000553945 INHBEP58166 350 aa28.02■■■□□ 2.08
NEK9-203ENST00000553945 FOXP4Q8IVH2 680 aaPredicted RBP28.02■■■□□ 2.08
NEK9-203ENST00000553945 APPBP2Q92624 585 aa28.02■■■□□ 2.08
NEK9-203ENST00000553945 PRKAB2O43741 272 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 CTNND1O60716 968 aaKnown RBP28.01■■■□□ 2.07
NEK9-203ENST00000553945 PPATQ06203 517 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 PPIL2Q13356 520 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 PLEKHM2Q8IWE5 1019 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 SAGE1Q9NXZ1 904 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 DOCK1Q14185 1865 aa28.01■■■□□ 2.07
NEK9-203ENST00000553945 DDX60LQ5H9U9 1706 aaKnown RBP28.01■■■□□ 2.07
NEK9-203ENST00000553945 POLR3DP05423 398 aaPredicted RBP28■■■□□ 2.07
NEK9-203ENST00000553945 GTF2A2P52657 109 aa28■■■□□ 2.07
NEK9-203ENST00000553945 TTC6Q86TZ1 520 aa28■■■□□ 2.07
NEK9-203ENST00000553945 OSBP2Q969R2 916 aa28■■■□□ 2.07
NEK9-203ENST00000553945 EVI5LQ96CN4 794 aa28■■■□□ 2.07
NEK9-203ENST00000553945 MCM9Q9NXL9 1143 aa28■■■□□ 2.07
NEK9-203ENST00000553945 IRF6O14896 467 aa27.99■■■□□ 2.07
NEK9-203ENST00000553945 METTL16Q86W50 562 aaKnown RBP27.99■■■□□ 2.07
NEK9-203ENST00000553945 MS4A4AQ96JQ5 239 aa27.99■■■□□ 2.07
NEK9-203ENST00000553945 DCP1AQ9NPI6 582 aaPredicted RBP27.99■■■□□ 2.07
NEK9-203ENST00000553945 ATP8A2Q9NTI2 1148 aa27.99■■■□□ 2.07
NEK9-203ENST00000553945 SLC4A4Q9Y6R1 1079 aa27.99■■■□□ 2.07
NEK9-203ENST00000553945 IFNL1Q8IU54 200 aa27.98■■■□□ 2.07
NEK9-203ENST00000553945 OSBPL3Q9H4L5 887 aa27.98■■■□□ 2.07
NEK9-203ENST00000553945 DNAJC18Q9H819 358 aa27.98■■■□□ 2.07
NEK9-203ENST00000553945 ATAD5Q96QE3 1844 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 CCL15-CCL14A0A0B4J2E2 113 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 TRIM6-TRIM34B2RNG4 842 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 PTPRAP18433 802 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 RRP1BQ14684 758 aaKnown RBP27.97■■■□□ 2.07
NEK9-203ENST00000553945 CCL15Q16663 113 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 STRBPQ96SI9 672 aaKnown RBP27.97■■■□□ 2.07
NEK9-203ENST00000553945 SERPINB13Q9UIV8 391 aa27.97■■■□□ 2.07
NEK9-203ENST00000553945 TESPA1A2RU30 521 aaPredicted RBP27.96■■■□□ 2.07
NEK9-203ENST00000553945 M0R2C6 588 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 IGF2BP3O00425 579 aaKnown RBP eCLIP27.96■■■□□ 2.07
NEK9-203ENST00000553945 CAP2P40123 477 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 PLCD1P51178 756 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 SNAPC2Q13487 334 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 BRI3BPQ8WY22 251 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 DDRGK1Q96HY6 314 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 EHD4Q9H223 541 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 PRDM10Q9NQV6 1147 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.96■■■□□ 2.07
NEK9-203ENST00000553945 ZHX2Q9Y6X8 837 aa27.96■■■□□ 2.07
NEK9-203ENST00000553945 BAZ2AQ9UIF9 1905 aaKnown RBP27.95■■■□□ 2.06
NEK9-203ENST00000553945 CETPP11597 493 aa27.95■■■□□ 2.06
NEK9-203ENST00000553945 PDE4AP27815 886 aa27.95■■■□□ 2.06
NEK9-203ENST00000553945 OTUD7BQ6GQQ9 843 aa27.95■■■□□ 2.06
NEK9-203ENST00000553945 RILPL2Q969X0 211 aa27.95■■■□□ 2.06
NEK9-203ENST00000553945 SEC62Q99442 399 aaKnown RBP27.95■■■□□ 2.06
NEK9-203ENST00000553945 PTPN18Q99952 460 aa27.95■■■□□ 2.06
NEK9-203ENST00000553945 GPAA1O43292 621 aa27.94■■■□□ 2.06
NEK9-203ENST00000553945 TBC1D8O95759 1140 aa27.94■■■□□ 2.06
NEK9-203ENST00000553945 ALDH1A1P00352 501 aa27.94■■■□□ 2.06
NEK9-203ENST00000553945 CENPBP07199 599 aaPredicted RBP27.94■■■□□ 2.06
NEK9-203ENST00000553945 CYP2D6P10635 497 aa27.94■■■□□ 2.06
NEK9-203ENST00000553945 ZMYM1Q5SVZ6 1142 aa27.94■■■□□ 2.06
NEK9-203ENST00000553945 CCDC84Q86UT8 332 aaPredicted RBP27.94■■■□□ 2.06
NEK9-203ENST00000553945 EVX2Q03828 476 aa27.93■■■□□ 2.06
NEK9-203ENST00000553945 KCNH4Q9UQ05 1017 aa27.93■■■□□ 2.06
NEK9-203ENST00000553945 NEFLP07196 543 aa27.92■■■□□ 2.06
NEK9-203ENST00000553945 AMOTL1Q8IY63 956 aa27.92■■■□□ 2.06
NEK9-203ENST00000553945 PHIPQ8WWQ0 1821 aa27.92■■■□□ 2.06
NEK9-203ENST00000553945 GDF11O95390 407 aa27.91■■■□□ 2.06
NEK9-203ENST00000553945 COL13A1Q5TAT6 717 aaPredicted RBP27.91■■■□□ 2.06
NEK9-203ENST00000553945 AFG3L2Q9Y4W6 797 aa27.91■■■□□ 2.06
NEK9-203ENST00000553945 GSG1L2A8MUP6 293 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 USP17L12C9JPN9 530 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 USP17L21D6R901 530 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 CXCL11O14625 94 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 GNAT2P19087 354 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 JAG1P78504 1218 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 TATDN1Q6P1N9 297 aa27.9■■■□□ 2.06
NEK9-203ENST00000553945 CYP2D7A0A087X1C5 515 aa27.89■■■□□ 2.06
NEK9-203ENST00000553945 TRIM75PA6NK02 468 aa27.89■■■□□ 2.06
NEK9-203ENST00000553945 USP17L5A8MUK1 530 aa27.89■■■□□ 2.06
NEK9-203ENST00000553945 ASNSP08243 561 aa27.89■■■□□ 2.06
NEK9-203ENST00000553945 SHROOM1Q2M3G4 852 aaPredicted RBP27.89■■■□□ 2.06
NEK9-203ENST00000553945 FAM43AQ8N2R8 423 aa27.89■■■□□ 2.06
NEK9-203ENST00000553945 APPP05067 770 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 SHMT1P34896 483 aa27.88■■■□□ 2.05
NEK9-203ENST00000553945 GABPAQ06546 454 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms