RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 PI4KBQ9UBF8 816 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 SAP30BPQ9UHR5 308 aaKnown RBP14.31□□□□□ -0.12
TMEM253-202ENST00000553744 HERC5Q9UII4 1024 aaKnown RBP14.31□□□□□ -0.12
TMEM253-202ENST00000553744 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
TMEM253-202ENST00000553744 LAMB1P07942 1786 aa14.3□□□□□ -0.12
TMEM253-202ENST00000553744 SPDYE5A6NIY4 337 aa14.3□□□□□ -0.12
TMEM253-202ENST00000553744 FAM196BA6NMK8 535 aa14.3□□□□□ -0.12
TMEM253-202ENST00000553744 RGS19P49795 217 aa14.3□□□□□ -0.12
TMEM253-202ENST00000553744 LBX1P52954 281 aa14.3□□□□□ -0.12
TMEM253-202ENST00000553744 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
TMEM253-202ENST00000553744 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
TMEM253-202ENST00000553744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
TMEM253-202ENST00000553744 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
TMEM253-202ENST00000553744 PRKAB2O43741 272 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 SLC4A8Q2Y0W8 1093 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
TMEM253-202ENST00000553744 ERO1BQ86YB8 467 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 MYH1P12882 1939 aa14.29□□□□□ -0.12
TMEM253-202ENST00000553744 MANSC4A6NHS7 340 aaPredicted RBP14.28□□□□□ -0.12
TMEM253-202ENST00000553744 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 M0R2C6 588 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 GPAA1O43292 621 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 CTNND1O60716 968 aaKnown RBP14.28□□□□□ -0.12
TMEM253-202ENST00000553744 SREBF2Q12772 1141 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 DOCK1Q14185 1865 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 TICAM2Q86XR7 235 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
TMEM253-202ENST00000553744 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
TMEM253-202ENST00000553744 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
TMEM253-202ENST00000553744 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 EHD4Q9H223 541 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
TMEM253-202ENST00000553744 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
TMEM253-202ENST00000553744 PPATQ06203 517 aa14.27□□□□□ -0.13
TMEM253-202ENST00000553744 PPIL2Q13356 520 aa14.27□□□□□ -0.13
TMEM253-202ENST00000553744 RILPL2Q969X0 211 aa14.27□□□□□ -0.13
TMEM253-202ENST00000553744 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
TMEM253-202ENST00000553744 PICK1Q9NRD5 415 aa14.27□□□□□ -0.13
TMEM253-202ENST00000553744 SERPINB13Q9UIV8 391 aa14.27□□□□□ -0.13
TMEM253-202ENST00000553744 CA12O43570 354 aa14.26□□□□□ -0.13
TMEM253-202ENST00000553744 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
TMEM253-202ENST00000553744 GNAT2P19087 354 aa14.26□□□□□ -0.13
TMEM253-202ENST00000553744 TM4SF4P48230 202 aa14.26□□□□□ -0.13
TMEM253-202ENST00000553744 PLCD1P51178 756 aa14.26□□□□□ -0.13
TMEM253-202ENST00000553744 RRP1BQ14684 758 aaKnown RBP14.26□□□□□ -0.13
TMEM253-202ENST00000553744 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
TMEM253-202ENST00000553744 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
TMEM253-202ENST00000553744 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 IRF6O14896 467 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 GSPT1P15170 499 aaKnown RBP14.25□□□□□ -0.13
TMEM253-202ENST00000553744 PTPRAP18433 802 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 CAP2P40123 477 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 GTF2A2P52657 109 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 INHBEP58166 350 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 GABPAQ06546 454 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 GIMAP6Q6P9H5 292 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
TMEM253-202ENST00000553744 A0A0D9SFI3 127 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 CYP2D6P10635 497 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 EVX2Q03828 476 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 SNAPC2Q13487 334 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 AMOTL1Q8IY63 956 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 EPB41L4AQ9HCS5 686 aaPredicted RBP14.24□□□□□ -0.13
TMEM253-202ENST00000553744 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
TMEM253-202ENST00000553744 ARPP21Q9UBL0 812 aaPredicted RBP14.24□□□□□ -0.13
TMEM253-202ENST00000553744 KCNH4Q9UQ05 1017 aa14.24□□□□□ -0.13
TMEM253-202ENST00000553744 BAZ2AQ9UIF9 1905 aaKnown RBP14.23□□□□□ -0.13
TMEM253-202ENST00000553744 ATAD5Q96QE3 1844 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 CCL15-CCL14A0A0B4J2E2 113 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 USP17L21D6R901 530 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM253-202ENST00000553744 SDSP20132 328 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 SHMT1P34896 483 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 MLLT1Q03111 559 aaPredicted RBP14.23□□□□□ -0.13
TMEM253-202ENST00000553744 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
TMEM253-202ENST00000553744 CCL15Q16663 113 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 C12orf60Q5U649 245 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 TATDN1Q6P1N9 297 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
TMEM253-202ENST00000553744 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms