RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ZAP70P43403 619 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 PHKBQ93100 1093 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 FERMT1Q9BQL6 677 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 RPL13P26373 211 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 ARHGEF25Q86VW2 580 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 RGS22Q8NE09 1264 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 PRDM1O75626 825 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 TRAF5O00463 557 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 TNNC1P63316 161 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
ARHGEF40-202ENST00000553709 NF2P35240 595 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 CYP26C1Q6V0L0 522 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 IFT81Q8WYA0 676 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 NAPGQ99747 312 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 STAMBPO95630 424 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 CTDSPL2Q05D32 466 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 CNNM4Q6P4Q7 775 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 IMPG2Q9BZV3 1241 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 SAP30BPQ9UHR5 308 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 MNAT1P51948 309 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 NFE2L3Q9Y4A8 694 aa17.22■□□□□ 0.35
ARHGEF40-202ENST00000553709 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 ZNF532Q9HCE3 1301 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 TMEM110-MUSTN1A8MSY1 372 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 PTH1RQ03431 593 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 TUBB2AQ13885 445 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 KDRP35968 1356 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 PAK1Q13153 545 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 KIF4AO95239 1232 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
ARHGEF40-202ENST00000553709 TAF5LO75529 589 aa17.21■□□□□ 0.34
ARHGEF40-202ENST00000553709 TERF1P54274 439 aa17.21■□□□□ 0.34
ARHGEF40-202ENST00000553709 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.34
ARHGEF40-202ENST00000553709 A0A0D9SFI3 127 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 ARHGAP6O43182 974 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 POSTNQ15063 836 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 DCAF17Q5H9S7 520 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 CSGALNACT2Q8N6G5 542 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 EBAG9O00559 213 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 CDCA7Q9BWT1 371 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 GNPATO15228 680 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 FMNL3Q8IVF7 1028 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 EYA3Q99504 573 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 MROH5Q6ZUA9 1318 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
ARHGEF40-202ENST00000553709 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 CDC42BPGQ6DT37 1551 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 TCHPQ9BT92 498 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 IGSF3O75054 1194 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 CFAP58Q5T655 872 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 PPP1R14CQ8TAE6 165 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZBTB9Q96C00 473 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 ZNF274Q96GC6 653 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 ATP2A1O14983 1001 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 KCNQ3O43525 872 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 GJC1P36383 396 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
ARHGEF40-202ENST00000553709 ADALQ6DHV7 355 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 PAIP2Q9BPZ3 127 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 KCNJ14Q9UNX9 436 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 PKP1Q13835 747 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 C6orf163Q5TEZ5 329 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 GSTA5Q7RTV2 222 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 FAM76AQ8TAV0 307 aa17.18■□□□□ 0.34
ARHGEF40-202ENST00000553709 IQCGQ9H095 443 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms