RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SLC45A1Q9Y2W3 748 aa19.44■□□□□ 0.7
ACTN1-209ENST00000553659 DOCK3Q8IZD9 2030 aa19.44■□□□□ 0.7
ACTN1-209ENST00000553659 A0A1B0GUL7 405 aa19.43■□□□□ 0.7
ACTN1-209ENST00000553659 H0YGN5 161 aa19.43■□□□□ 0.7
ACTN1-209ENST00000553659 CTNND1O60716 968 aaKnown RBP19.43■□□□□ 0.7
ACTN1-209ENST00000553659 BTDP43251 543 aa19.43■□□□□ 0.7
ACTN1-209ENST00000553659 FXR1P51114 621 aaKnown RBP eCLIP19.43■□□□□ 0.7
ACTN1-209ENST00000553659 SHISA4Q96DD7 197 aa19.43■□□□□ 0.7
ACTN1-209ENST00000553659 DDX4Q9NQI0 724 aaKnown RBP19.43■□□□□ 0.7
ACTN1-209ENST00000553659 SRGAP3O43295 1099 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 GJB1P08034 283 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 GJA8P48165 433 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 UBXN2AP68543 259 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 PRKCZQ05513 592 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 TFCP2Q12800 502 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 GADL1Q6ZQY3 521 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 BIN2Q9UBW5 565 aaPredicted RBP19.42■□□□□ 0.7
ACTN1-209ENST00000553659 MROH7-TTC4A0A0A0MT08 1334 aa19.42■□□□□ 0.7
ACTN1-209ENST00000553659 GPR75-ASB3A0A0A6YYF3 556 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
ACTN1-209ENST00000553659 CCL5P13501 91 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 PICALMQ13492 652 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 MTX1Q13505 466 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 BMP2KLQ5H9B9 411 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 LNPKQ9C0E8 428 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 RNF208Q9H0X6 261 aa19.41■□□□□ 0.7
ACTN1-209ENST00000553659 NOP58Q9Y2X3 529 aaKnown RBP19.41■□□□□ 0.7
ACTN1-209ENST00000553659 TBC1D12O60347 775 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 SLURP2P0DP57 97 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 RHBDL3P58872 404 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 MECOMQ03112 1051 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 SLAIN1Q8ND83 568 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 DPF3Q92784 378 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 GABRQQ9UN88 632 aa19.4■□□□□ 0.7
ACTN1-209ENST00000553659 ATAD5Q96QE3 1844 aa19.39■□□□□ 0.7
ACTN1-209ENST00000553659 UBE2Q1Q7Z7E8 422 aa19.39■□□□□ 0.69
ACTN1-209ENST00000553659 ZNF384Q8TF68 577 aa19.39■□□□□ 0.69
ACTN1-209ENST00000553659 NEUROD6Q96NK8 337 aa19.39■□□□□ 0.69
ACTN1-209ENST00000553659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.39■□□□□ 0.69
ACTN1-209ENST00000553659 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
ACTN1-209ENST00000553659 MAP4K4O95819 1239 aaPredicted RBP19.38■□□□□ 0.69
ACTN1-209ENST00000553659 LDHCP07864 332 aa19.38■□□□□ 0.69
ACTN1-209ENST00000553659 ATP8B2P98198 1209 aa19.38■□□□□ 0.69
ACTN1-209ENST00000553659 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
ACTN1-209ENST00000553659 CEP290O15078 2479 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 ADCY3O60266 1144 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 FLT3LGP49771 235 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 GSTO1P78417 241 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 SPATA5Q8NB90 893 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 PXYLP1Q8TE99 480 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
ACTN1-209ENST00000553659 HTATIP2Q9BUP3 242 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.696e-7■■■■■ 31.5
ACTN1-209ENST00000553659 AGTPBP1Q9UPW5 1226 aa19.37■□□□□ 0.69
ACTN1-209ENST00000553659 IRF5Q13568 498 aa19.36■□□□□ 0.69
ACTN1-209ENST00000553659 GORABQ5T7V8 394 aa19.36■□□□□ 0.69
ACTN1-209ENST00000553659 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
ACTN1-209ENST00000553659 U2AF1L4Q8WU68 220 aaKnown RBP19.36■□□□□ 0.69
ACTN1-209ENST00000553659 NSUN4Q96CB9 384 aaKnown RBP19.36■□□□□ 0.69
ACTN1-209ENST00000553659 OSBPL5Q9H0X9 879 aaPredicted RBP19.36■□□□□ 0.69
ACTN1-209ENST00000553659 UNC93B1Q9H1C4 597 aa19.36■□□□□ 0.69
ACTN1-209ENST00000553659 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.36■□□□□ 0.69
ACTN1-209ENST00000553659 TNPO2O14787 897 aaKnown RBP19.35■□□□□ 0.69
ACTN1-209ENST00000553659 SGPL1O95470 568 aa19.35■□□□□ 0.69
ACTN1-209ENST00000553659 ARID4AP29374 1257 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-209ENST00000553659 PI16Q6UXB8 463 aa19.35■□□□□ 0.69
ACTN1-209ENST00000553659 CCDC84Q86UT8 332 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-209ENST00000553659 PROCA1Q8NCQ7 364 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-209ENST00000553659 COL2A1P02458 1487 aaPredicted RBP19.35■□□□□ 0.69
ACTN1-209ENST00000553659 LOC285556D6RIA3 1793 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 CAPN2P17655 700 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 G3BP1Q13283 466 aaKnown RBP eCLIP19.34■□□□□ 0.69
ACTN1-209ENST00000553659 TREML2Q5T2D2 321 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 CHRDL2Q6WN34 429 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 ANKRD13CQ8N6S4 541 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 TBC1D2Q9BYX2 928 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 RAI14Q9P0K7 980 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 PNMA3Q9UL41 463 aa19.34■□□□□ 0.69
ACTN1-209ENST00000553659 FARP2O94887 1054 aaPredicted RBP19.33■□□□□ 0.68
ACTN1-209ENST00000553659 UQCRFS1P1P0C7P4 283 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 ELNP15502 786 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 SPP2Q13103 211 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 COA7Q96BR5 231 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
ACTN1-209ENST00000553659 TRIOBPQ9H2D6 2365 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 CDK5RAP2Q96SN8 1893 aa19.33■□□□□ 0.68
ACTN1-209ENST00000553659 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 RAB11FIP3O75154 756 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 INHAP05111 366 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 CAP2P40123 477 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 MCAMP43121 646 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 FAM110CQ1W6H9 321 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
ACTN1-209ENST00000553659 MYO5AQ9Y4I1 1855 aaKnown RBP19.32■□□□□ 0.68
ACTN1-209ENST00000553659 GCLCP48506 637 aaPredicted RBP19.31■□□□□ 0.68
ACTN1-209ENST00000553659 TEX11Q8IYF3 940 aa19.31■□□□□ 0.68
ACTN1-209ENST00000553659 RBM27Q9P2N5 1060 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms