RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CPA1P15085 419 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 FGD1P98174 961 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 PDE4BQ07343 736 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 RASA3Q14644 834 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 RABEP1Q15276 862 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 FKBP1CQ5VVH2 108 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 USP50Q70EL3 339 aaPredicted RBP11.56□□□□□ -0.56
CHD8-204ENST00000553622 SLC44A5Q8NCS7 719 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 STAG1Q8WVM7 1258 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 KCNB2Q92953 911 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 DHX36Q9H2U1 1008 aaKnown RBP11.56□□□□□ -0.56
CHD8-204ENST00000553622 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 NEK4P51957 841 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 CHST3Q7LGC8 479 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 FAM83AQ86UY5 434 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 SULF1Q8IWU6 871 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 KIF2CQ99661 725 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 KRT23Q9C075 422 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 DEFB129Q9H1M3 183 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 NMRK2Q9NPI5 230 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 ANAPC4Q9UJX5 808 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
CHD8-204ENST00000553622 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
CHD8-204ENST00000553622 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 POTECB2RU33 542 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 KDM4AO75164 1064 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 CDK8P49336 464 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 TSGA10IPQ3SY00 556 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 PRAMEF18Q5VWM3 479 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 PNMA8AQ86V59 439 aaPredicted RBP11.54□□□□□ -0.56
CHD8-204ENST00000553622 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
CHD8-204ENST00000553622 ESR2Q92731 530 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 TACC3Q9Y6A5 838 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
CHD8-204ENST00000553622 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
CHD8-204ENST00000553622 ST18O60284 1047 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
CHD8-204ENST00000553622 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
CHD8-204ENST00000553622 RPS6KB1P23443 525 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 MCM5P33992 734 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 RUFY3Q7L099 469 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 LRRC2Q9BYS8 371 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHD8-204ENST00000553622 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 SWAP70Q9UH65 585 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 PITPNM2Q9BZ72 1349 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
CHD8-204ENST00000553622 PRC1O43663 620 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 ORC4O43929 436 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 NBPF12Q5TAG4 269 aaPredicted RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 CYB5R4Q7L1T6 521 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 USP48Q86UV5 1035 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 ZKSCAN3Q9BRR0 538 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 UBAC1Q9BSL1 405 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 EHD4Q9H223 541 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
CHD8-204ENST00000553622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
CHD8-204ENST00000553622 MYH6P13533 1939 aa11.52□□□□□ -0.57
CHD8-204ENST00000553622 OTOFQ9HC10 1997 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 RASA1P20936 1047 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 SHMT1P34896 483 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 TFAP4Q01664 338 aa11.51□□□□□ -0.57
CHD8-204ENST00000553622 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
CHD8-204ENST00000553622 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms