RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 LTBP3Q9NS15 1303 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 SLC22A31A6NKX4 558 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 DIAPH1O60610 1272 aaKnown RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 DNAJC6O75061 913 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 DDAH1O94760 285 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 EPXP11678 715 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 NME1P15531 152 aaKnown RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 ALAS2P22557 587 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 MAOBP27338 520 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 CDC25BP30305 580 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 ARL4DP49703 201 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 IGBP1P78318 339 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 RING1Q06587 406 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 ZYXQ15942 572 aaKnown RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 CDCP2Q5VXM1 449 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 FAM117BQ6P1L5 589 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 SPATC1Q76KD6 591 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 HDXQ7Z353 690 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 ATG4CQ96DT6 458 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 COL25A1Q9BXS0 654 aaPredicted RBP5.56□□□□□ -1.52
TDP1-207ENST00000553617 CNNM2Q9H8M5 875 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 SPC25Q9HBM1 224 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 SLC12A7Q9Y666 1083 aa5.56□□□□□ -1.52
TDP1-207ENST00000553617 UNC5AQ6ZN44 842 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 C1orf229Q6ZS94 237 aaPredicted RBP5.55□□□□□ -1.52
TDP1-207ENST00000553617 C16orf86Q6ZW13 317 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 NLRC3Q7RTR2 1065 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 KLHDC7BQ96G42 594 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 FEZ1Q99689 392 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 PRDM6Q9NQX0 595 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 ADAM30Q9UKF2 790 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 PTCH2Q9Y6C5 1203 aa5.55□□□□□ -1.52
TDP1-207ENST00000553617 KDM2BQ8NHM5 1336 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 SYNGAP1Q96PV0 1343 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 LOC100289279A0A1B0GTE1 492 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 LILRB5O75023 590 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 ADAM11O75078 769 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 RAB11FIP3O75154 756 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 LIG1P18858 919 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 PLCG1P19174 1290 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 IBSPP21815 317 aaPredicted RBP5.54□□□□□ -1.52
TDP1-207ENST00000553617 MLECQ14165 292 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 SETDB1Q15047 1291 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 TKFCQ3LXA3 575 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 ZC3H12AQ5D1E8 599 aaKnown RBP5.54□□□□□ -1.52
TDP1-207ENST00000553617 MSL1Q68DK7 614 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 KLHL23Q8NBE8 558 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 WDR18Q9BV38 432 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 CARD10Q9BWT7 1032 aa5.54□□□□□ -1.52
TDP1-207ENST00000553617 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
TDP1-207ENST00000553617 PHAXQ9H814 394 aaKnown RBP5.54□□□□□ -1.52
TDP1-207ENST00000553617 DCDC2CA8MYV0 355 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 M0R082 166 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 DLGAP3O95886 979 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 GYS2P54840 703 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 HNRNPUQ00839 825 aaKnown RBP eCLIP5.53□□□□□ -1.52
TDP1-207ENST00000553617 RASSF7Q02833 373 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 SRSF11Q05519 484 aaKnown RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 PDE4BQ07343 736 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 SSRP1Q08945 709 aaKnown RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 COL9A3Q14050 684 aaPredicted RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 PDE3AQ14432 1141 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 NCAPHQ15003 741 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 VHLLQ6RSH7 139 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 C8orf86Q6ZUL3 223 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 EEPD1Q7L9B9 569 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 WFDC8Q8IUA0 241 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 RPUSD2Q8IZ73 545 aaKnown RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 SYNPOQ8N3V7 929 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 TMEM151AQ8N4L1 468 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 KLHL6Q8WZ60 621 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ACDQ96AP0 544 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ELMO3Q96BJ8 720 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ACSF2Q96CM8 615 aaPredicted RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 ZNF587Q96SQ5 575 aaPredicted RBP5.53□□□□□ -1.52
TDP1-207ENST00000553617 SLC9A7Q96T83 725 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 PFDN2Q9UHV9 154 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ADAMTS8Q9UP79 889 aa5.53□□□□□ -1.52
TDP1-207ENST00000553617 ADCY3O60266 1144 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 SUSD5O60279 629 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 GRK4P32298 578 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 ERVK-24P63145 666 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 AMPD3Q01432 767 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 LONRF2Q1L5Z9 754 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
TDP1-207ENST00000553617 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
TDP1-207ENST00000553617 CHSY3Q70JA7 882 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 C12orf40Q86WS4 652 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 WNT10AQ9GZT5 417 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 EPN3Q9H201 632 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 HIF3AQ9Y2N7 669 aa5.52□□□□□ -1.53
TDP1-207ENST00000553617 CHURC1-FNTBB4DL54 471 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms