RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 MTA1Q13330 715 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 SCARF1Q14162 830 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 MTA3Q9BTC8 594 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 DDX49Q9Y6V7 483 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 TJP1Q07157 1748 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 IPO7O95373 1038 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 GUCY2CP25092 1073 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 MCM4P33991 863 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 HMGN5P82970 282 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 GRM1Q13255 1194 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 UVSSAQ2YD98 709 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 LARP1BQ659C4 914 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 JARID2Q92833 1246 aaPredicted RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 TNPO1Q92973 898 aaKnown RBP4.72□□□□□ -1.65
RDH11-204ENST00000553578 FAM86C1Q9NVL1 165 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 TNS2Q63HR2 1409 aa4.72□□□□□ -1.65
RDH11-204ENST00000553578 K7ELQ4 463 aaPredicted RBP4.71□□□□□ -1.65
RDH11-204ENST00000553578 ZIC2O95409 532 aaPredicted RBP4.71□□□□□ -1.65
RDH11-204ENST00000553578 CCT2P78371 535 aaKnown RBP4.71□□□□□ -1.65
RDH11-204ENST00000553578 ZRSR2Q15696 482 aaKnown RBP4.71□□□□□ -1.65
RDH11-204ENST00000553578 USP48Q86UV5 1035 aa4.71□□□□□ -1.65
RDH11-204ENST00000553578 NOB1Q9ULX3 412 aaKnown RBP4.71□□□□□ -1.65
RDH11-204ENST00000553578 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 ITFG2Q969R8 447 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 MAF1Q9H063 256 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 CEP126Q9P2H0 1117 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 ANKRD36CQ5JPF3 1778 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 DDX60Q8IY21 1712 aaKnown RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 DISP2A7MBM2 1401 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 GOLGA6CA6NDK9 693 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 GOLGA6BA6NDN3 693 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 SOWAHDA6NJG2 315 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 TULP2O00295 520 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 CAND2O75155 1236 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 PARNO95453 639 aaKnown RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 GOLGA6DP0CG33 693 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 IFRD2Q12894 506 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 CHAF1AQ13111 956 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 EIF4A2Q14240 407 aaKnown RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 CLUL1Q15846 466 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 C10orf62Q5T681 223 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 DNAJC14Q6Y2X3 702 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 SEPT12Q8IYM1 358 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 CDCA7Q9BWT1 371 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 GOLGA6AQ9NYA3 693 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 COL5A3P25940 1745 aaPredicted RBP4.71□□□□□ -1.66
RDH11-204ENST00000553578 ARFGEF2Q9Y6D5 1785 aa4.71□□□□□ -1.66
RDH11-204ENST00000553578 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 GYS2P54840 703 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 INTS6LQ5JSJ4 861 aaKnown RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 IP6K1Q92551 441 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 COG3Q96JB2 828 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 SCLT1Q96NL6 688 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 NIF3L1Q9GZT8 377 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 FANCLQ9NW38 375 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 NLRP2Q9NX02 1062 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 OGFRQ9NZT2 677 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 SOS2Q07890 1332 aaPredicted RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 KCPQ6ZWJ8 1503 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 ST8SIA5O15466 376 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 VAMP4O75379 141 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 AVPP01185 164 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 MYL3P08590 195 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 GRM5P41594 1212 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 BORCS6Q96GS4 357 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 SPC25Q9HBM1 224 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 RAD51AP2Q09MP3 1159 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 INTS3Q68E01 1043 aaKnown RBP4.7□□□□□ -1.66
RDH11-204ENST00000553578 KCNH5Q8NCM2 988 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 ANKRD20A12PQ8NF67 263 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 MYRIPQ8NFW9 859 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 ZNF232Q9UNY5 417 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 PTPRCP08575 1304 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 MAP3K19Q56UN5 1328 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 ARAP2Q8WZ64 1704 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 BCL9O00512 1426 aa4.7□□□□□ -1.66
RDH11-204ENST00000553578 ROBO1Q9Y6N7 1651 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SFI1A8K8P3 1242 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L15C9J2P7 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L10C9JJH3 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L13C9JLJ4 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L12C9JPN9 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L11C9JVI0 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L21D6R901 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L18D6R9N7 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L22D6RA61 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L17D6RBQ6 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L19D6RCP7 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L20D6RJB6 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SCP2P22307 547 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 NOP2P46087 812 aaKnown RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 USP17L24Q0WX57 530 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 NME9Q86XW9 330 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 TSR2Q969E8 191 aaKnown RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 UCN2Q96RP3 112 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms