RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SP3Q02447 781 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 TSHZ3Q63HK5 1081 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 ZFYVE28Q9HCC9 887 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 AFG3L2Q9Y4W6 797 aa22.24■■□□□ 1.15
SHMT2-206ENST00000553529 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
SHMT2-206ENST00000553529 HMMRO75330 724 aa22.23■■□□□ 1.15
SHMT2-206ENST00000553529 FBXO46Q6PJ61 603 aaPredicted RBP22.23■■□□□ 1.15
SHMT2-206ENST00000553529 CLASRPQ8N2M8 674 aaKnown RBP22.23■■□□□ 1.15
SHMT2-206ENST00000553529 BOLA2Q9H3K6 86 aa22.23■■□□□ 1.15
SHMT2-206ENST00000553529 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
SHMT2-206ENST00000553529 ADGRA2Q96PE1 1338 aa22.23■■□□□ 1.15
SHMT2-206ENST00000553529 DDX60LQ5H9U9 1706 aaKnown RBP22.23■■□□□ 1.15
SHMT2-206ENST00000553529 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
SHMT2-206ENST00000553529 IFIT2P09913 472 aaKnown RBP22.22■■□□□ 1.15
SHMT2-206ENST00000553529 HSP90AB4PQ58FF6 505 aa22.22■■□□□ 1.15
SHMT2-206ENST00000553529 NOL10Q9BSC4 688 aaKnown RBP22.22■■□□□ 1.15
SHMT2-206ENST00000553529 PICK1Q9NRD5 415 aa22.22■■□□□ 1.15
SHMT2-206ENST00000553529 MYH1P12882 1939 aa22.21■■□□□ 1.15
SHMT2-206ENST00000553529 TLR2O60603 784 aa22.21■■□□□ 1.15
SHMT2-206ENST00000553529 GDF11O95390 407 aa22.21■■□□□ 1.15
SHMT2-206ENST00000553529 GADL1Q6ZQY3 521 aa22.21■■□□□ 1.15
SHMT2-206ENST00000553529 A0A0G2JLL6 359 aaPredicted RBP22.2■■□□□ 1.14
SHMT2-206ENST00000553529 SMIM22K7EJ46 135 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 TBC1D12O60347 775 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 CTNND1O60716 968 aaKnown RBP22.2■■□□□ 1.14
SHMT2-206ENST00000553529 BAG3O95817 575 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 PDE6AP16499 860 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
SHMT2-206ENST00000553529 TREML2Q5T2D2 321 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 PRRT2Q7Z6L0 340 aaPredicted RBP22.2■■□□□ 1.14
SHMT2-206ENST00000553529 ANKRD23Q86SG2 305 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 ERO1AQ96HE7 468 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 RIOK1Q9BRS2 568 aaKnown RBP22.2■■□□□ 1.14
SHMT2-206ENST00000553529 PTPN22Q9Y2R2 807 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 NAV1Q8NEY1 1877 aa22.2■■□□□ 1.14
SHMT2-206ENST00000553529 RAB11FIP3O75154 756 aa22.19■■□□□ 1.14
SHMT2-206ENST00000553529 CRBNQ96SW2 442 aa22.19■■□□□ 1.14
SHMT2-206ENST00000553529 EFCC1Q9HA90 598 aa22.19■■□□□ 1.14
SHMT2-206ENST00000553529 ZNF532Q9HCE3 1301 aa22.18■■□□□ 1.14
SHMT2-206ENST00000553529 TCRBV5S4A2TA0A5A2 114 aa22.18■■□□□ 1.14
SHMT2-206ENST00000553529 RGS19P49795 217 aa22.18■■□□□ 1.14
SHMT2-206ENST00000553529 C17orf99Q6UX52 265 aa22.18■■□□□ 1.14
SHMT2-206ENST00000553529 PTCH2Q9Y6C5 1203 aa22.18■■□□□ 1.14
SHMT2-206ENST00000553529 LOC285556D6RIA3 1793 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 CENPFP49454 3210 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 PEX10O60683 326 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 MYCP01106 439 aaPredicted RBP22.17■■□□□ 1.14
SHMT2-206ENST00000553529 CAP2P40123 477 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 MAP3K12Q12852 859 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 SPP2Q13103 211 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 PKN2Q16513 984 aaKnown RBP22.17■■□□□ 1.14
SHMT2-206ENST00000553529 SLC9C2Q5TAH2 1124 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 LCORLQ8N3X6 602 aa22.17■■□□□ 1.14
SHMT2-206ENST00000553529 OTUD7AQ8TE49 926 aaPredicted RBP22.17■■□□□ 1.14
SHMT2-206ENST00000553529 CXCL11O14625 94 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 MAP4K4O95819 1239 aaPredicted RBP22.16■■□□□ 1.14
SHMT2-206ENST00000553529 CYP2D6P10635 497 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 USP5P45974 858 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 LACTBP83111 547 aaPredicted RBP22.16■■□□□ 1.14
SHMT2-206ENST00000553529 SDR42E1Q8WUS8 393 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 LRRCC1Q9C099 1032 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 PI4KBQ9UBF8 816 aa22.16■■□□□ 1.14
SHMT2-206ENST00000553529 POTEFA5A3E0 1075 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 PRKAB2O43741 272 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 PLCG2P16885 1265 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 HMGCS2P54868 508 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 MLLT1Q03111 559 aaPredicted RBP22.15■■□□□ 1.14
SHMT2-206ENST00000553529 ARMT1Q9H993 441 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 PAG1Q9NWQ8 432 aa22.15■■□□□ 1.14
SHMT2-206ENST00000553529 MAGEB6P1A0A0J9YX57 407 aa22.14■■□□□ 1.13
SHMT2-206ENST00000553529 PLCD1P51178 756 aa22.14■■□□□ 1.13
SHMT2-206ENST00000553529 CRACR2BQ8N4Y2 399 aaPredicted RBP22.14■■□□□ 1.13
SHMT2-206ENST00000553529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.14■■□□□ 1.13
SHMT2-206ENST00000553529 TRIM47Q96LD4 638 aa22.14■■□□□ 1.13
SHMT2-206ENST00000553529 ATP5JP18859 108 aa22.13■■□□□ 1.13
SHMT2-206ENST00000553529 METTL16Q86W50 562 aaKnown RBP22.13■■□□□ 1.13
SHMT2-206ENST00000553529 SH3TC2Q8TF17 1288 aa22.13■■□□□ 1.13
SHMT2-206ENST00000553529 HAUS7Q99871 368 aa22.13■■□□□ 1.13
SHMT2-206ENST00000553529 DCTPP1Q9H773 170 aa22.13■■□□□ 1.13
SHMT2-206ENST00000553529 ZCCHC17Q9NP64 241 aaKnown RBP22.13■■□□□ 1.13
SHMT2-206ENST00000553529 HERC5Q9UII4 1024 aaKnown RBP22.13■■□□□ 1.13
SHMT2-206ENST00000553529 MYH7P12883 1935 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 MGAMO43451 1857 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 BCRP11274 1271 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 MTMR2Q13614 643 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 ZNF280CQ8ND82 737 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 DHX36Q9H2U1 1008 aaKnown RBP22.12■■□□□ 1.13
SHMT2-206ENST00000553529 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
SHMT2-206ENST00000553529 BRCA2P51587 3418 aa22.12■■□□□ 1.13
SHMT2-206ENST00000553529 TNRC18O15417 2968 aaPredicted RBP22.11■■□□□ 1.13
SHMT2-206ENST00000553529 CYP2D7A0A087X1C5 515 aa22.11■■□□□ 1.13
SHMT2-206ENST00000553529 ADD2P35612 726 aa22.11■■□□□ 1.13
SHMT2-206ENST00000553529 PSMC4P43686 418 aa22.11■■□□□ 1.13
SHMT2-206ENST00000553529 SLC44A5Q8NCS7 719 aa22.11■■□□□ 1.13
SHMT2-206ENST00000553529 PARK7Q99497 189 aaKnown RBP22.11■■□□□ 1.13
SHMT2-206ENST00000553529 ZBTB21Q9ULJ3 1066 aa22.11■■□□□ 1.13
SHMT2-206ENST00000553529 BAZ2AQ9UIF9 1905 aaKnown RBP22.11■■□□□ 1.13
SHMT2-206ENST00000553529 USP17L5A8MUK1 530 aa22.1■■□□□ 1.13
SHMT2-206ENST00000553529 MBD4O95243 580 aa22.1■■□□□ 1.13
SHMT2-206ENST00000553529 TTF1Q15361 905 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms