RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CXCL11O14625 94 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 PPP1R37O75864 691 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 OSBPP22059 807 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 GRK4P32298 578 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 TFCP2Q12800 502 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 E2F4Q16254 413 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
ACTN1-208ENST00000553370 C17orf99Q6UX52 265 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 XAGE2Q96GT9 111 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 RAI14Q9P0K7 980 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 ZNF112Q9UJU3 913 aa12.22□□□□□ -0.45
ACTN1-208ENST00000553370 MYH8P13535 1937 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 GAKO14976 1311 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 PDS5AQ29RF7 1337 aaKnown RBP12.21□□□□□ -0.45
ACTN1-208ENST00000553370 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 LDHCP07864 332 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 CYP2C8P10632 490 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 TIMM10P62072 90 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 G3BP1Q13283 466 aaKnown RBP eCLIP12.21□□□□□ -0.454e-8■■□□□ 11.5
ACTN1-208ENST00000553370 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 DPF3Q92784 378 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 RNF208Q9H0X6 261 aa12.21□□□□□ -0.45
ACTN1-208ENST00000553370 TNPO2O14787 897 aaKnown RBP12.2□□□□□ -0.46
ACTN1-208ENST00000553370 GNAI2P04899 355 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 PTPRAP18433 802 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
ACTN1-208ENST00000553370 MECOMQ03112 1051 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.466e-7■■■■■ 31.5
ACTN1-208ENST00000553370 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
ACTN1-208ENST00000553370 A0A0G2JLL6 359 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-208ENST00000553370 CTNND1O60716 968 aaKnown RBP12.19□□□□□ -0.46
ACTN1-208ENST00000553370 CCL5P13501 91 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 PRKCZQ05513 592 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 MTFR1Q15390 333 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 PRRT2Q7Z6L0 340 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-208ENST00000553370 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
ACTN1-208ENST00000553370 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-208ENST00000553370 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 MAP3K13O43283 966 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
ACTN1-208ENST00000553370 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
ACTN1-208ENST00000553370 ARHGAP45Q92619 1136 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 CLUAP1Q96AJ1 413 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 COA7Q96BR5 231 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 DDX4Q9NQI0 724 aaKnown RBP12.18□□□□□ -0.46
ACTN1-208ENST00000553370 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
ACTN1-208ENST00000553370 PHF20L1A8MW92 1017 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 H0YGN5 161 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 ADCY3O60266 1144 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-208ENST00000553370 BCRP11274 1271 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 CTGFP29279 349 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 PI16Q6UXB8 463 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
ACTN1-208ENST00000553370 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
ACTN1-208ENST00000553370 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 CCER2I3L3R5 266 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 BAG3O95817 575 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 ELNP15502 786 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 MOGSQ13724 837 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 AS3MTQ9HBK9 375 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-208ENST00000553370 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
ACTN1-208ENST00000553370 COL2A1P02458 1487 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-208ENST00000553370 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
ACTN1-208ENST00000553370 INHAP05111 366 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 GJB1P08034 283 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 TRIM27P14373 513 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 PLCG2P16885 1265 aa12.15□□□□□ -0.46
ACTN1-208ENST00000553370 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms