RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ZNF213O14771 459 aa20.47■□□□□ 0.87
ITGA5-213ENST00000553071 PCP11498 1178 aaKnown RBP20.47■□□□□ 0.87
ITGA5-213ENST00000553071 ZNF408Q9H9D4 720 aa20.47■□□□□ 0.87
ITGA5-213ENST00000553071 GBA2Q9HCG7 927 aaPredicted RBP20.47■□□□□ 0.87
ITGA5-213ENST00000553071 ANAPC4Q9UJX5 808 aa20.47■□□□□ 0.87
ITGA5-213ENST00000553071 PLCD1P51178 756 aa20.46■□□□□ 0.87
ITGA5-213ENST00000553071 PDE4BQ07343 736 aa20.46■□□□□ 0.87
ITGA5-213ENST00000553071 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
ITGA5-213ENST00000553071 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
ITGA5-213ENST00000553071 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
ITGA5-213ENST00000553071 GINM1Q9NU53 330 aa20.46■□□□□ 0.87
ITGA5-213ENST00000553071 TMEM88BA6NKF7 163 aa20.45■□□□□ 0.86
ITGA5-213ENST00000553071 FOXP2O15409 715 aa20.45■□□□□ 0.86
ITGA5-213ENST00000553071 PPARAQ07869 468 aa20.45■□□□□ 0.86
ITGA5-213ENST00000553071 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
ITGA5-213ENST00000553071 LSG1Q9H089 658 aaKnown RBP20.45■□□□□ 0.86
ITGA5-213ENST00000553071 IL25Q9H293 177 aa20.45■□□□□ 0.86
ITGA5-213ENST00000553071 USP2O75604 605 aaPredicted RBP20.44■□□□□ 0.86
ITGA5-213ENST00000553071 MAP3K9P80192 1104 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 GABPAQ06546 454 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 CST9Q5W186 159 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 C16orf86Q6ZW13 317 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 ANKRD13AQ8IZ07 590 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 KLRG1Q96E93 195 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 CCDC17Q96LX7 622 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 MKNK2Q9HBH9 465 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
ITGA5-213ENST00000553071 ANGEL1Q9UNK9 670 aaKnown RBP20.44■□□□□ 0.86
ITGA5-213ENST00000553071 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
ITGA5-213ENST00000553071 APLP1P51693 650 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 PTH1RQ03431 593 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 TATDN1Q6P1N9 297 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 CDAN1Q8IWY9 1227 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 CSADQ9Y600 493 aa20.43■□□□□ 0.86
ITGA5-213ENST00000553071 FOCADQ5VW36 1801 aa20.42■□□□□ 0.86
ITGA5-213ENST00000553071 CYP2D6P10635 497 aa20.42■□□□□ 0.86
ITGA5-213ENST00000553071 MCCP23508 829 aa20.42■□□□□ 0.86
ITGA5-213ENST00000553071 ZNF444Q8N0Y2 327 aaPredicted RBP20.42■□□□□ 0.86
ITGA5-213ENST00000553071 WRNIP1Q96S55 665 aa20.42■□□□□ 0.86
ITGA5-213ENST00000553071 RBM8AQ9Y5S9 174 aaKnown RBP20.42■□□□□ 0.86
ITGA5-213ENST00000553071 ROBO3Q96MS0 1386 aa20.42■□□□□ 0.86
ITGA5-213ENST00000553071 ZKSCAN1P17029 563 aaPredicted RBP20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CDK8P49336 464 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 PRKG1Q13976 671 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 SLC4A8Q2Y0W8 1093 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CERKLQ49MI3 558 aaPredicted RBP20.41■□□□□ 0.86
ITGA5-213ENST00000553071 LDLRAD1Q5T700 205 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 MFSD6Q6ZSS7 791 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGA5-213ENST00000553071 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CABP5Q9NP86 173 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
ITGA5-213ENST00000553071 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
ITGA5-213ENST00000553071 PHF20L1A8MW92 1017 aa20.4■□□□□ 0.86
ITGA5-213ENST00000553071 FMR1Q06787 632 aaKnown RBP eCLIP20.4■□□□□ 0.86
ITGA5-213ENST00000553071 TRDNQ13061 729 aa20.4■□□□□ 0.86
ITGA5-213ENST00000553071 AKNAD1Q5T1N1 836 aa20.4■□□□□ 0.86
ITGA5-213ENST00000553071 MYH1P12882 1939 aa20.39■□□□□ 0.86
ITGA5-213ENST00000553071 ASNSP08243 561 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 FGRP09769 529 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 CAP2P40123 477 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 C1QTNF8P60827 252 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 PPP4R3BQ5MIZ7 849 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 NOL9Q5SY16 702 aaKnown RBP20.39■□□□□ 0.85
ITGA5-213ENST00000553071 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 SLC10A4Q96EP9 437 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 DYNLL2Q96FJ2 89 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 PICK1Q9NRD5 415 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 ABT1Q9ULW3 272 aaKnown RBP20.39■□□□□ 0.85
ITGA5-213ENST00000553071 TLL2Q9Y6L7 1015 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.85
ITGA5-213ENST00000553071 UBE2Q2LH0YL09 131 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 ORC4O43929 436 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 SHMT1P34896 483 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 HUNKP57058 714 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 HAND2P61296 217 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 KRT32Q14532 448 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 C8orf34Q49A92 452 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 SAPCD2Q86UD0 394 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 SCYL3Q8IZE3 742 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 USP26Q9BXU7 913 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 KRT23Q9C075 422 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 DNAJC18Q9H819 358 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
ITGA5-213ENST00000553071 NAV1Q8NEY1 1877 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 SSC5DA1L4H1 1573 aa20.38■□□□□ 0.85
ITGA5-213ENST00000553071 CYP21A2P08686 494 aa20.37■□□□□ 0.85
ITGA5-213ENST00000553071 CTDSPL2Q05D32 466 aa20.37■□□□□ 0.85
ITGA5-213ENST00000553071 ABCB5Q2M3G0 1257 aa20.37■□□□□ 0.85
ITGA5-213ENST00000553071 CREB3L3Q68CJ9 461 aa20.37■□□□□ 0.85
ITGA5-213ENST00000553071 PAPPA2Q9BXP8 1791 aa20.36■□□□□ 0.85
ITGA5-213ENST00000553071 FAM196BA6NMK8 535 aa20.36■□□□□ 0.85
ITGA5-213ENST00000553071 TSGA10IPQ3SY00 556 aa20.36■□□□□ 0.85
ITGA5-213ENST00000553071 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
ITGA5-213ENST00000553071 TMEM179Q6ZVK1 233 aa20.36■□□□□ 0.85
ITGA5-213ENST00000553071 ESR2Q92731 530 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms